| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3477 |
|---|
| Symbol | |
|---|
| ID | 4069053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 4101916 |
|---|
| End bp | 4102482 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637985499 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_592552 |
|---|
| Protein GI | 94970504 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1943] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.379705 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.40189 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTGGG GCCTCAAGCG ATACCAGCAC ACCGGTCAGT CCCACTTCAT AACCTTCAGC
TGCTACCACC GTCTGCCCTA CTTATCGAGT ACCAGCGCAA AACAACAATT CGAGTTGTCG
TTGGAAGACA CTCGGGTTCG CTACGGGATG CCGGTGGCAG GGTATGTCGT GATGCCCGAG
CATGTGCATC TGCTGGTGTG GGAACCGCAG AGATCGAATC TGGCAACGGC CCTCCAGTCG
ATCAAGCAAT CTGTCTCGCG CCTCCTGATC GGCGGCAGGG AACACTTCTG GCAAAAGCGT
TATTACGATT TCAACGTCCG CGCGGCGGAC AAGTTCTGGG AGAAGCTCCA CTACCTCCAC
CAAAATCCTG TAAAACGCGG TTTGGTAAAA AGCCCGGAAC AGTGGACCTG GAGCAGCTTT
CGCCATCATG CTTTCGGTGA AATCGGTACT GTAGAACTCG AATCCCACTG GACGGCACTT
CGCCGTGAAC GCGCCGGGAT TCGGTTCGAG CTCAAGAAAG ATCGCGACGC GACGACCTTC
GGTGATCCCG GGTCTACCAA GATATAG
|
|---|
| Protein sequence | MPWGLKRYQH TGQSHFITFS CYHRLPYLSS TSAKQQFELS LEDTRVRYGM PVAGYVVMPE
HVHLLVWEPQ RSNLATALQS IKQSVSRLLI GGREHFWQKR YYDFNVRAAD KFWEKLHYLH
QNPVKRGLVK SPEQWTWSSF RHHAFGEIGT VELESHWTAL RRERAGIRFE LKKDRDATTF
GDPGSTKI
|
|---|
| |