Gene Acid345_3454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3454 
Symbol 
ID4069030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4074545 
End bp4075240 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content61% 
IMG OID637985476 
Producthypothetical protein 
Protein accessionYP_592529 
Protein GI94970481 
COG category[S] Function unknown 
COG ID[COG2930] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0652967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGT TATCGGTTGT TTTGATGGCG CTCGCGCTGT GCGGAATTGC GTTCGCGGCA 
GACGAGCAGG GTCAGGTGCA GGAACGCGTG CAGCGAGCGG GCACGGTGTT CAATGAGATT
ATGTCGGCTC CCGACAATTC CATTCCCGGC AACGTGCTGG AGAAGGCCAA GTGCATCGCG
ATCGTCCCGA GCATGGTCAG CGGCGGCTTT GTAGTCGGCG CGAAGCATGG ACGCGGCGTC
GCTACTTGCC GTACCGCTAG TGGCTGGAGC GCTCCGGCGT TCTTTGAAGT GACCGGCGGC
AGCTACGGCT TGCAGATCGG CGCGCAGAAG ACCGACCTCG TAATGCTGAT CATGAATGAC
AAAGGCATGC AGCAACTGCT GTCGAGCAAG TTCGAGCTTG GCGGCGAAGC TGGTGTCGCG
GCTGGACCAG TAGGACGCCA GGGTACCGCG GCCACCGACT GGAAGATGGA TGCCGCAGTG
TTGACGTATT CGCGTTCGAA GGGCGTGTTC GCCGGCGTGG ATCTTTCCGG CGCAGCGATC
AAGCAGGACG ACGACTCGAC GAAGGCGTTC TATGGGAAGC AAGTGAGCTT TAAGGATGCG
TTGATGGGGC AGGTCCCACC TCCGGCACAA GCGAAAGACT TCCTGGCGCA GATCAAGACG
GCTACGGCAG CCCAGGCTTC GGCGGCGGCC CACTAA
 
Protein sequence
MRKLSVVLMA LALCGIAFAA DEQGQVQERV QRAGTVFNEI MSAPDNSIPG NVLEKAKCIA 
IVPSMVSGGF VVGAKHGRGV ATCRTASGWS APAFFEVTGG SYGLQIGAQK TDLVMLIMND
KGMQQLLSSK FELGGEAGVA AGPVGRQGTA ATDWKMDAAV LTYSRSKGVF AGVDLSGAAI
KQDDDSTKAF YGKQVSFKDA LMGQVPPPAQ AKDFLAQIKT ATAAQASAAA H