Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3247 |
Symbol | |
ID | 4072582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3846384 |
End bp | 3847925 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637985268 |
Product | beta-lactamase |
Protein accession | YP_592322 |
Protein GI | 94970274 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0660544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATGCT TCCGGACTCT CGCTTTCATC CTTCTCCTCT CCTCCGCGGC CCTGGCGCAA CTCACTCCCT CCGATCTCGA CGCCTACGTC GAACGCGCCC GTAAGGTCTT CGATACTCCC GGCATCGCCG TTGCCATCGT CAAGGACGGC CGCCTCGTCT TCGCCAAAGG TTACGGCGTT AAAAAACTCG GTGATCCCGC GCCCGTCACC GAGAACACCC TCTTCGGCAT CGGCTCCAAC ACCAAGGCCT TCAGCGCCGC CACGATCGCA ACCCTCGTCG ACGAAGGCAA ACTCTCGTGG GACGATAAAG TCTCCGAAAA GCTCCCCGGC TTCGCCATGT ACGATCCCTA CGCTTCGCAC GAAATGACAG TGCGCGACCT GCTCTGCCAT CGCAGCGGAC TCGGCCTCGG CGAGGGGGAC ATGCTTCTCT GGCCGCGCAC CACGTACACC CGCGCTGAAA TCGTGCAGCG CATCCGTTAC ATGAAGCCGG CCTACAGCTT CCGCAGCAAG TACGCCTATA GCAATCTGAT GTTCATCACC GCCGGTGAAC TCACGGCGGC AGTCACCGGC AAGTCGTGGG AAGAGTCGGT TCGCGAGCGC ATCTTCCAAC CGCTCGGCAT GAATTCCAGT AACTTCAGCA ACGCCGATCT CAAACCCGGC GCAGACTTCG CATGGCCGCA TTCGCGCAAC GAAAGCAAGA TGACCGTTGA CGCCATGGAG AACAAAGACA CCATCAGCTC CGCTGGCGCC ATTAACTCTT CCGTCTCCGA CCTCGCGAAG TGGATGATGG CGCAACTCAA TCAAGGCAAG CTACCGAACG GCGACAAGCG CCTCTTCAGC GAAAAGCAAT GGCAAGAGAT GTGGTCGCCC CAAACCATCG TGCCCACGGA GAACAGCACC GGCCCGCTCG CCGCCCTGAA CACCGACTTC TCTGCCTACG GTCTCGGTTG GGGCCTGCGG GAATATCACG GCCACAAACT CGTCGGACAC TCCGGCGGTC TCATGGGCTT CCTCACCCGC GTCCTCATGG TCCCCGATCA GAACCTCGGT GTCGTCGTCC TCACCAACAC CGACACCTCC GACGGCCCCA TGAACGCCAT CGCCTACCAC ATCGTCGATT CCTACTTGGG CATCACCGGC AACGACTGGA TCGCCGCCTG GAAATCTGCT GACGAAAAAT CGCAGCACGA CGCCGACGAA ACCATGAAGA AAGCCGCCAC CGAACGCGTC GCCAGTTCAG GCCCCTCGCT CCCGCTCGCG AAATACGCCG GAGCCTATCG TGACGCCTGG TACGGTCCCG CGACCATCGC CATGAAGGAC GGCAAGCTCA CCTTCACCCT CGACCGCTCC CAGAATGCCA CTGGCGAACT CACCCCGTGG CAGCACGACA CCTTCAAACT CCACTGGGCT CTAGAAGATG CCTACGTCAC CTTCGCGCTG AACCCCGACG GCACCATCCA CCACTTCACC ATGCTGCCAG TCTCGCCCCT CGCGGATTTC AGTTACGACT ACCAGGACCT GTACTTCACG CCAGGCAAAT GA
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Protein sequence | MRCFRTLAFI LLLSSAALAQ LTPSDLDAYV ERARKVFDTP GIAVAIVKDG RLVFAKGYGV KKLGDPAPVT ENTLFGIGSN TKAFSAATIA TLVDEGKLSW DDKVSEKLPG FAMYDPYASH EMTVRDLLCH RSGLGLGEGD MLLWPRTTYT RAEIVQRIRY MKPAYSFRSK YAYSNLMFIT AGELTAAVTG KSWEESVRER IFQPLGMNSS NFSNADLKPG ADFAWPHSRN ESKMTVDAME NKDTISSAGA INSSVSDLAK WMMAQLNQGK LPNGDKRLFS EKQWQEMWSP QTIVPTENST GPLAALNTDF SAYGLGWGLR EYHGHKLVGH SGGLMGFLTR VLMVPDQNLG VVVLTNTDTS DGPMNAIAYH IVDSYLGITG NDWIAAWKSA DEKSQHDADE TMKKAATERV ASSGPSLPLA KYAGAYRDAW YGPATIAMKD GKLTFTLDRS QNATGELTPW QHDTFKLHWA LEDAYVTFAL NPDGTIHHFT MLPVSPLADF SYDYQDLYFT PGK
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