| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3219 |
|---|
| Symbol | |
|---|
| ID | 4070431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 3810624 |
|---|
| End bp | 3812567 |
|---|
| Gene Length | 1944 bp |
|---|
| Protein Length | 647 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637985240 |
|---|
| Product | DNA mismatch repair protein MutL |
|---|
| Protein accession | YP_592294 |
|---|
| Protein GI | 94970246 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
|---|
| TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.428383 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.251683 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGCA TCCACGTTCT CTCCGAACAT GTCGCCAACA AAATCGCCGC CGGCGAGGTG
GTCGAACGCC CCGCGTCGGT AGTGAAGGAG TTGATCGAGA ACTCGCTCGA TGCCGGCGCC
AAGCGCATTC GCGTGCACGT AGAAGCTGGT GGCAAGAAAC TGATCCACAT TGTGGACGAC
GGCATCGGCA TGTTTCGCGA CGACGCTATG CTTGCGTTCG AACGTCACGC GACTTCGAAA
CTGAAAAATC CCGAGGACCT GCTCAGCATC TCGACACTCG GCTTCCGCGG TGAAGCACTC
CCGTCCATCG CATCGGTTGC GCGCGTCCGC CTTGAAACTC GCGCCAACGA AGAACCAAGC
GGCACCGTCC TCGAGATCGC CGGCGGCAAG ATTCTGAAGA TCGAAGAAGC CGGCCTACCC
CTCGGTACCT CCATCGCAAT AAAAGACCTC TTTTTCAATA CACCCGCCCG CAAGAAATTT
CTGAAAAGCG AATCCACCGA GCTCTCCCAC ATCGCGTCGC TGGTCACCCA TTACGCGCTC
GCGCATCCCG AGATGCATTG GGAGCTGCAC TCCGCGACCA ACGCACTGCT CATTGCTCCG
CCAGTCGCCA CGCAGAGCGA ACGCATCTAC CAGGTCTTCG GCAACGAGAC GCTCGACCAA
CTCATCCCGC TCGCCGCGCA AATCAAACTC GAACGCATCG GGCTGCCTAA GCCACCGCCG
TGGCTACGCA AAAACGAAGA CGACGAGGAA GAACAAACAG TCGAGCCCGG TGAAGTTCGA
CTCCACGGAT TCATCTCGAA GCCCGAAATC CAGAAGCTCA ATCGCAACTC GATCTTCGTC
TTCGTCAACG GCCGTCTCAT TCGCGACCGC CTCGTCCAGC ACGCACTCAC CGAGGCCTAT
CGCAACATCC TGCCACCCAC GCTCTTCCCT GTCGTTCTCC TCTTTCTCGA AATGCCCTAC
ACGGAAGTCG ACGTCAACGT GCATCCGTCG AAGACCGAAG TCCGCTTCCG CCAGCAGTCG
CTCGTCCATG ACTTCGTGCG CGACTCGGTC CGCGCGGCAT TGTCGAAAGC GCGCCCAATC
CCACAGTTCA TTTCCGAGAT TCACGCCCAA CCGAAGGCTT CGCCGTCACT TACACCCGGC
GCACAGACCG CGCCTGCCTT CGCGTTGGAA GCGCAGGAAG AACCCGTGCT GCCCGAGCGC
CTTCAATTCG GTGGCGACGC CATCTCCGTC GAGGCCAACG CAGCTGTGCC CGTCGCCCGC
TTCGGTGCGC AGACCTTCGG TTCTCACGTC GCGCAGCAAC AAACGGTTCC CGAGACCAGT
GGCTGCGACT ACGAACTCCC CGATCTACCG GCCGCTGACG CTCCGCTCGC ATCGCTCAGG
CCCCTCGGCC AGATTCGCGA ATCCTTCATT CTTGCTACGA GCAACGAAGG CCTCTGGATC
ATCGACCAGC ACGTCGCCCA CGAGCGCGTA CTCTTCGAGA AGGTCCTAAA GCAACGAGCA
GCCGCCTCGG TTGAAACCCA GCAATTACTC ATGCCTCTGA TCGTCGAACT CACTCCCGGC
CAGCAAGCCG TCTTCACCGA GATCGCCGAA GAGCTTCACC AGAACGGCTT CGAAGTCGAA
CCCTTTGGCT CAAGGACTTT CGCCGTCAAA GCAGCACCCG CAGGAATCCG CGCCGAAGAT
ATCGAAAAGA CCCTGAGCGA AGTCCTCGAT TCCTTCGAAC GCGAGCAGCA GGCCTTCAAC
CTTGAGCACG CGCAAAGCCG CATCGCCGCC ACCATTGCCT GCCACGCAGC CATCAAGGTC
AACATGCCGC TCACGCAGGA TAAAATGGAG TGGCTCCTCG CCGAGCTCGC CAAAACCGAG
CACCCCATGA CTTGTCCGCA CGGACGCCCC ATCGTTCTTC GCTATTCTGT CAAGGACATT
CAGAAGGCCT TTAAGCGCAT CTGA
|
|---|
| Protein sequence | MGRIHVLSEH VANKIAAGEV VERPASVVKE LIENSLDAGA KRIRVHVEAG GKKLIHIVDD
GIGMFRDDAM LAFERHATSK LKNPEDLLSI STLGFRGEAL PSIASVARVR LETRANEEPS
GTVLEIAGGK ILKIEEAGLP LGTSIAIKDL FFNTPARKKF LKSESTELSH IASLVTHYAL
AHPEMHWELH SATNALLIAP PVATQSERIY QVFGNETLDQ LIPLAAQIKL ERIGLPKPPP
WLRKNEDDEE EQTVEPGEVR LHGFISKPEI QKLNRNSIFV FVNGRLIRDR LVQHALTEAY
RNILPPTLFP VVLLFLEMPY TEVDVNVHPS KTEVRFRQQS LVHDFVRDSV RAALSKARPI
PQFISEIHAQ PKASPSLTPG AQTAPAFALE AQEEPVLPER LQFGGDAISV EANAAVPVAR
FGAQTFGSHV AQQQTVPETS GCDYELPDLP AADAPLASLR PLGQIRESFI LATSNEGLWI
IDQHVAHERV LFEKVLKQRA AASVETQQLL MPLIVELTPG QQAVFTEIAE ELHQNGFEVE
PFGSRTFAVK AAPAGIRAED IEKTLSEVLD SFEREQQAFN LEHAQSRIAA TIACHAAIKV
NMPLTQDKME WLLAELAKTE HPMTCPHGRP IVLRYSVKDI QKAFKRI
|
|---|
| |