| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3095 |
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| Symbol | |
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| ID | 4072659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 3677865 |
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| End bp | 3679097 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637985114 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_592170 |
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| Protein GI | 94970122 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGAAG TCAAGAATCA AGAACTAGAA AAACCGAAAT CCGCGCGTGA AGAAGAGCAC
CACGATCCCG AGACCGAACG TCCCGAGCGT CCGCGCAGCT TCTTCCAGCG CAATCCCGCG
GCGCGCTGGA TCTTCCTGCT CGTCCTCATC GCCCTCATCG TCGGTGCAGT CTTCGTGTGG
CGTTACTACA CCGTTCGCGA GAGTACCGAC GACGCCCAGA TCGATGGCCA CCTCACGCCC
ATCAGCTCGC GCGTAAGCGG CACCGTCGTC ACCCTGAACG TCACGGACAA TCAGGTGGTG
AACGCCGGAG ACCTCATCGT CCAGCTCGAT CCCAAGGACT ATGAAGTCGC GCTCTCCCGC
GTGAAAGCCG ATCTCGGCGA TGCCATTGCC ACCGCCGAAG GCGCTCGCAC CAGCGTGCCG
ATCACCACCA TCAGCACCGG TGGCAGCCTC GACACCGCAA AGGCGAACCT TGCTGCCTCA
AAGAAGGACG TAGATGCTGC GTCGGCACGC GTCGTTGAAG CCCAGGCCAA CTACGACAAG
CTCTCCAAGG ATCTCGAACG CGCCAAAATG CTCGTCCAGA AAGACGAGAT CTCGCGTCAG
CAGTACGACT CCGCCGTCGC CGCCGAACAG GCCGCGAAAG CCACGGTTGA TGCCGCGCAG
GCGCAGTTCG CCGCTTCGCA GAGCCACGTC GCGCAGGCGC AGGCCCAGCT CCAGACCGCC
GGCACCGCGC CGCAACAGGT CCTGGTTTCG CGCTCCCGGG TTGGTTCTGC CGAGGCGCAG
GTCCAGCGTC AGCAAGCCGC CGTCAACCAG GCGCAACTCA ATCTTGGCTA CACTGCGGTT
CGCGCTCCTG CCAACGGCAT CATCAGCAAT CGCACCGTCG AAGTCGGCCA GACCGTTTCT
CCTGGCCAGC CTCTCGCCGC GTTAATTGAT CTTGACGACG TTTGGGTCAC CGCAAACTTC
AAAGAAGACC AGTTGAAGAA AATGAAGATC GGCCAGAAGG TCAAGATCCA CGTCGATGCC
TTCGACAAAG ACTTCGACGG CCATCTCGAC AGCTTCGCTG GCGCCAGCGG CGCGCGTTTC
AGCCTGCTGC CACCGGAGAA CGCAACTGGA AACTACGTCA AAGTCGTGCA GCGCCTGCCC
GTGAAGATCG TCTTCGAAAA GGGCCAGGAC CCGCAGCACA TGCTCCGTCC CGGATTGTCG
GTAGTCCCGA CCGTCCTCAC AGATTCGAAG TAA
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| Protein sequence | MPEVKNQELE KPKSAREEEH HDPETERPER PRSFFQRNPA ARWIFLLVLI ALIVGAVFVW
RYYTVRESTD DAQIDGHLTP ISSRVSGTVV TLNVTDNQVV NAGDLIVQLD PKDYEVALSR
VKADLGDAIA TAEGARTSVP ITTISTGGSL DTAKANLAAS KKDVDAASAR VVEAQANYDK
LSKDLERAKM LVQKDEISRQ QYDSAVAAEQ AAKATVDAAQ AQFAASQSHV AQAQAQLQTA
GTAPQQVLVS RSRVGSAEAQ VQRQQAAVNQ AQLNLGYTAV RAPANGIISN RTVEVGQTVS
PGQPLAALID LDDVWVTANF KEDQLKKMKI GQKVKIHVDA FDKDFDGHLD SFAGASGARF
SLLPPENATG NYVKVVQRLP VKIVFEKGQD PQHMLRPGLS VVPTVLTDSK
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