Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3046 |
Symbol | |
ID | 4071953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3618148 |
End bp | 3618753 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637985065 |
Product | transcriptional regulator |
Protein accession | YP_592121 |
Protein GI | 94970073 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.948594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAAAGAGG CGATTGCAGT GGTGAACGAA ACCATCGTTA GCGGGCTCAA GCCGTATCGC ATTGGGGAGA AGCTGCGCGC TCTCCGCTTG AAAAAGAAAC TAGGACTCGT CGAACTCGGG AAACATACCG GGCTGTCGCC GGCATTGCTG TCGAAGCTGG AACGCGGCAA GTTATTTCCC ACTTTGCCGA CACTGCTGCG GATCGCGCTG GTGTTCAGCG TTGGGCTCGA TTATTTCTTT GCGGATGAGA GTAGACGGCA TGTCGTTTCG GTCGTGCGCA AGGACGAACG CCTGCGCTTC CCGGAGCGGC CGAATACCCG GGACGTCGCC TATTACTTTG AGAGCCTCGA CTTCGCCGCC CTTGAGCCTA AGCTGAACGC CTTTCTTGCC GACTTCGAAC ATGTACCGGC GGAGACCCTG CGATTGCATC AGCACCAGGG TTTTGAGTTT CTGCATACAC TCGCCGGCAA ACTCGAACTT GTGATCGGCG GGATTCCTTA CGAGCTGAGC CAGGGGGATT CGATCTATTT TGATTCCTCG GTGCCGCACA CCTATCGCAA CGCGCAGAAG AAGCCCTGCT CCGCGTTGGT CGTGACGGCG GAGTAG
|
Protein sequence | MKEAIAVVNE TIVSGLKPYR IGEKLRALRL KKKLGLVELG KHTGLSPALL SKLERGKLFP TLPTLLRIAL VFSVGLDYFF ADESRRHVVS VVRKDERLRF PERPNTRDVA YYFESLDFAA LEPKLNAFLA DFEHVPAETL RLHQHQGFEF LHTLAGKLEL VIGGIPYELS QGDSIYFDSS VPHTYRNAQK KPCSALVVTA E
|
| |