| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2951 |
|---|
| Symbol | |
|---|
| ID | 4070875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 3497616 |
|---|
| End bp | 3498104 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637984970 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_592026 |
|---|
| Protein GI | 94969978 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.144629 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGAAG AAAAGGACCT TCTCTCCGGT GATTACCGGG CGCTCGCGGA GTTTCGGTAT
CAGATTCGTA AGTTTCTCCG CTTCAGTGAA GAGGCAGCAA GGACCGCAGG CCTTGAACCG
CAGCAGCACC AGTTGTTGCT CGCGGTAAAA GGACTTCCGG AGGGCGCGCG CGCAACGATT
GGCGAAATTG CCGATCGGTT GCAGATCCAG CACCACAGCA CAGTGGAGCT GGTGGATCGC
CTGGAACAAC ATGGATACGT CAACCGAAAA CGCAGCGACC GCGATAAGCG TGAGGTGCTG
ATCGTGTTGA CGCCTAAGTC CGAACGGATA TTGCGTGAAC TTTCGGTGCA CCACCAGGAG
CTTCTGCTGG AGCATGGGAC ATCGTTGGTA ACGTCACTGA AGAAGTCGAT GAACGCGAAA
GACCGGGGCA AGAAAGAGAA GTCCGCTCCC GCGAAGCTGA AAAGCCGAGC GGCAGCAGCG
CAGGATTAG
|
|---|
| Protein sequence | MGEEKDLLSG DYRALAEFRY QIRKFLRFSE EAARTAGLEP QQHQLLLAVK GLPEGARATI
GEIADRLQIQ HHSTVELVDR LEQHGYVNRK RSDRDKREVL IVLTPKSERI LRELSVHHQE
LLLEHGTSLV TSLKKSMNAK DRGKKEKSAP AKLKSRAAAA QD
|
|---|
| |