Gene Acid345_2897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2897 
Symbol 
ID4071198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3442540 
End bp3442881 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content61% 
IMG OID637984915 
ProductPadR family transcriptional regulator 
Protein accessionYP_591972 
Protein GI94969924 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID[TIGR03433] transcriptional regulator, Acidobacterial, PadR-family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.743193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATTC CATCGAAATT CGATCTTCCG CAAGGCACGC TTGATTTGCT GATTCTCCGC 
GTCGTCGCGC TTGGGCCGGT TCATGGCTAC GCGATCGTTC AGCGCATTCA GCAGATCTCC
AAGGACGCGC TCCACATCCA GCAGGGCAGC CTCTATCCCG CGCTGCACCG CCTCGAGAAC
AAAGAGTTCC TCACTGCCGA TTGGGGCCCG TCTGAAACCG GGCGCGAGGC CAAGTTCTAT
CGCCTTACGA CGAAGGGGCG CGCGCAACTC AAGGCGGAGA CCGAGAGCTG GACGCGCCTC
ACCGAAGTCG TCGGGATGAT CCTGCAGGGA GAACTCTCAT GA
 
Protein sequence
MPIPSKFDLP QGTLDLLILR VVALGPVHGY AIVQRIQQIS KDALHIQQGS LYPALHRLEN 
KEFLTADWGP SETGREAKFY RLTTKGRAQL KAETESWTRL TEVVGMILQG ELS