Gene Acid345_2890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2890 
Symbol 
ID4071191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3430952 
End bp3431728 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content59% 
IMG OID637984908 
Producthypothetical protein 
Protein accessionYP_591965 
Protein GI94969917 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA TCTCTCCAAC TGATATCGCT AAAGAGAAAA TCCTGGCTGT TCAGGAGTAC 
GCTCAGTTGG CGGGCCGTTC GCTCACCAAC CTGTTCTCCC AGCCGCGCTA TCTTTCAGAC
ACATTGCAGC AGGCCGACCT CATCGGCGTT GGCTCGCTCC CGATCGTCAT CCTCGCCGGC
TTTTTCACCG GCGCCGCGCT CGCGCTGAAC ACCTCCGCGA CGCTCCAGAA ATTCGGCTCT
ATCACCCTGA CCGGCCAACT TGTCTCTTAT TCCATGGTCC GCGAACTCGG CCCCGTGCTC
ACCGGCCTGA TGGTCGCTGG ACGCAACTCC AGCGGCATGG CCAGCGAACT CGGTTCCATG
AAGGTCACCG AGCAGATCGA CGCCATGCGC GCCCTCGGTA CCGATCCCTC GAAAAAGCTT
GTGACGCCGC GGGTCATCTC CACCGTCGTC ATGCTCTTCT TCCTGAGCAT CATCTCTGAC
TTGTTGGGAA TGGCTGGCGG TTTCATCATT TCCTGGACGC TTCTTGGCCT CGACGCCAAC
CAGTACTGGA CTACCGCCTA CCAGGCGCTC GTCTTTCAGG ATGTCTTGAT GGGACTCGTC
AAGCCCGTCG TCTTCGGCTT CTTCATCGCC AGTGTCGGCT GCTATTACGG CATGAATGCG
ACCGGCGGTA CGCAAGGTGT CGGCCGCGCG ACCACGCAGG CCGTGGTCAC GGCGTCCGTG
CTCATCATCG CCTCCGATTT ATTCATCACC CGTTTCCTCA TGGTCGCGCT CGGATAA
 
Protein sequence
MELISPTDIA KEKILAVQEY AQLAGRSLTN LFSQPRYLSD TLQQADLIGV GSLPIVILAG 
FFTGAALALN TSATLQKFGS ITLTGQLVSY SMVRELGPVL TGLMVAGRNS SGMASELGSM
KVTEQIDAMR ALGTDPSKKL VTPRVISTVV MLFFLSIISD LLGMAGGFII SWTLLGLDAN
QYWTTAYQAL VFQDVLMGLV KPVVFGFFIA SVGCYYGMNA TGGTQGVGRA TTQAVVTASV
LIIASDLFIT RFLMVALG