Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2880 |
Symbol | |
ID | 4071181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 3422335 |
End bp | 3423072 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637984898 |
Product | LmbE-like protein |
Protein accession | YP_591955 |
Protein GI | 94969907 |
COG category | [S] Function unknown |
COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAA TGCTCGTCGT GACCGCACAC CCCGACGACG AAGTCGGCGG CTTCGGCGGC ACCCTGATGA AATATCGCGC CGACGGGGTG GAGACCTCTG TCATCTCCCT CACCGCCGGC GAAGCCGGCA CCCACCGCGG CCACGCCAAG TCCGATGCCG ATCTCGCCGA GCTCCGTCGC GCCGAGCTCG CCGCCGCCGC CAACATCCTC AAACTCAGCC AGGCTTGGGT GCTCGACTAT AAAGACGGCG CACTCGATCG CGAAAATCTC TACCGGGTCG TCGGCGACTT AGTCCGCCGC ATCCGCGAAC TACGTCCGCA AGTCGTGCTC ACGTTCGGTC CCGAAGGCGC CGTCACCGGC CACCCCGACC ACTCCATGGC TTCGGCCTTC GCCACGCTCG CTTTCCAGTG GGCTGGCCGT AAAAACCGCT ACGCTGACCA ACTCTGGGAC GGCCTCGAAG TCCATCGTCC GCAAAAACTC TACTACCAGA CCACGGCAAG CCTGATCCCC GATCGCCCGC CAATCTCCCC CGCGCCCATC ACCTGTGATA TCGACATCAG GGAATGGATC GACGAGAAAA TCCGGGCCTT CAAACAACAC TCCTCACAAG CCCCACTCTT CGACACGTTC GAAGCCTACG CGCGCCTGCG CCTGAAGGAG TCATTTCACC TCGCGGCAAC AACATCGCCC CGCAGCATGG AAGTTGAAAC GGATTTGTTT ACCGGCGTGG AAGAATAG
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Protein sequence | MKRMLVVTAH PDDEVGGFGG TLMKYRADGV ETSVISLTAG EAGTHRGHAK SDADLAELRR AELAAAANIL KLSQAWVLDY KDGALDRENL YRVVGDLVRR IRELRPQVVL TFGPEGAVTG HPDHSMASAF ATLAFQWAGR KNRYADQLWD GLEVHRPQKL YYQTTASLIP DRPPISPAPI TCDIDIREWI DEKIRAFKQH SSQAPLFDTF EAYARLRLKE SFHLAATTSP RSMEVETDLF TGVEE
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