Gene Acid345_2880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2880 
Symbol 
ID4071181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3422335 
End bp3423072 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content62% 
IMG OID637984898 
ProductLmbE-like protein 
Protein accessionYP_591955 
Protein GI94969907 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA TGCTCGTCGT GACCGCACAC CCCGACGACG AAGTCGGCGG CTTCGGCGGC 
ACCCTGATGA AATATCGCGC CGACGGGGTG GAGACCTCTG TCATCTCCCT CACCGCCGGC
GAAGCCGGCA CCCACCGCGG CCACGCCAAG TCCGATGCCG ATCTCGCCGA GCTCCGTCGC
GCCGAGCTCG CCGCCGCCGC CAACATCCTC AAACTCAGCC AGGCTTGGGT GCTCGACTAT
AAAGACGGCG CACTCGATCG CGAAAATCTC TACCGGGTCG TCGGCGACTT AGTCCGCCGC
ATCCGCGAAC TACGTCCGCA AGTCGTGCTC ACGTTCGGTC CCGAAGGCGC CGTCACCGGC
CACCCCGACC ACTCCATGGC TTCGGCCTTC GCCACGCTCG CTTTCCAGTG GGCTGGCCGT
AAAAACCGCT ACGCTGACCA ACTCTGGGAC GGCCTCGAAG TCCATCGTCC GCAAAAACTC
TACTACCAGA CCACGGCAAG CCTGATCCCC GATCGCCCGC CAATCTCCCC CGCGCCCATC
ACCTGTGATA TCGACATCAG GGAATGGATC GACGAGAAAA TCCGGGCCTT CAAACAACAC
TCCTCACAAG CCCCACTCTT CGACACGTTC GAAGCCTACG CGCGCCTGCG CCTGAAGGAG
TCATTTCACC TCGCGGCAAC AACATCGCCC CGCAGCATGG AAGTTGAAAC GGATTTGTTT
ACCGGCGTGG AAGAATAG
 
Protein sequence
MKRMLVVTAH PDDEVGGFGG TLMKYRADGV ETSVISLTAG EAGTHRGHAK SDADLAELRR 
AELAAAANIL KLSQAWVLDY KDGALDRENL YRVVGDLVRR IRELRPQVVL TFGPEGAVTG
HPDHSMASAF ATLAFQWAGR KNRYADQLWD GLEVHRPQKL YYQTTASLIP DRPPISPAPI
TCDIDIREWI DEKIRAFKQH SSQAPLFDTF EAYARLRLKE SFHLAATTSP RSMEVETDLF
TGVEE