Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2878 |
Symbol | |
ID | 4071179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 3420785 |
End bp | 3421549 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637984896 |
Product | RNase HII |
Protein accession | YP_591953 |
Protein GI | 94969905 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTGCGCC CAAAGAAAAA ACCCGTACTC GGCAAAGACG GCAAGCCCCT CTCCGCCGCC GCTGCCAAAC TCCGCCTTCT CAAGCGCCTG AAGTGCACCA CCAAATACGA AAAGCTCGCC GCTGACTCCG GCGCAAAACT CATCGCCGGC ATAGATGAAG TCGGCCGCGG AGCGCTCTTC GGTCCCGTCG TCGCCGCTGC AGTCATACTC GATCCCAACT ATCGAATCAA AGGTCTGCGC GACTCCAAGC TTCTCCCGGC GGAAACTCGC GAAATCCTCT CCAAGCGTAT TCGCGAGCAC TGCATCGCCT GGTCCATCGC GGCCGTGGAT GTCGCCCGCA TTGATCAACT CAACATTTAC TGGGCTTCGA ACCTCGCCAT GAAGCACGCC GTCCGCGGGT TATCGTGCCA GCCCGATCAT CTGCTGATTG ACGCGATGAA ACTCGACCTC GACTGCGCCC AAACGCCGAT CATCCATGGC GACGCGCTCT CCGCCTCCAT CGCCGCCGCC TCCATCATCG CCAAGGTCCA CCGCGACGCC CTCATCCGCG AATGGGCGCC GATCTTCCCC GAATACGATC TCGCCAGCAA CAAAGGCTAC AGCGCGCCCA AGCACATCAA GGCGCTGCGC GAGTTCGGCC CATCGCCGCT GCATCGGCAA TCGTTCGCGC CGGTGTGGAT GGCCTCCGCC CCGCAAGAAG TCCTGGAATT TATGTTGGAA GAGACGGCCG ACACCGCCGT CCCACCGGAA GTTCTCGAAG ACTAG
|
Protein sequence | MVRPKKKPVL GKDGKPLSAA AAKLRLLKRL KCTTKYEKLA ADSGAKLIAG IDEVGRGALF GPVVAAAVIL DPNYRIKGLR DSKLLPAETR EILSKRIREH CIAWSIAAVD VARIDQLNIY WASNLAMKHA VRGLSCQPDH LLIDAMKLDL DCAQTPIIHG DALSASIAAA SIIAKVHRDA LIREWAPIFP EYDLASNKGY SAPKHIKALR EFGPSPLHRQ SFAPVWMASA PQEVLEFMLE ETADTAVPPE VLED
|
| |