Gene Acid345_2878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2878 
Symbol 
ID4071179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3420785 
End bp3421549 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content61% 
IMG OID637984896 
ProductRNase HII 
Protein accessionYP_591953 
Protein GI94969905 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGCC CAAAGAAAAA ACCCGTACTC GGCAAAGACG GCAAGCCCCT CTCCGCCGCC 
GCTGCCAAAC TCCGCCTTCT CAAGCGCCTG AAGTGCACCA CCAAATACGA AAAGCTCGCC
GCTGACTCCG GCGCAAAACT CATCGCCGGC ATAGATGAAG TCGGCCGCGG AGCGCTCTTC
GGTCCCGTCG TCGCCGCTGC AGTCATACTC GATCCCAACT ATCGAATCAA AGGTCTGCGC
GACTCCAAGC TTCTCCCGGC GGAAACTCGC GAAATCCTCT CCAAGCGTAT TCGCGAGCAC
TGCATCGCCT GGTCCATCGC GGCCGTGGAT GTCGCCCGCA TTGATCAACT CAACATTTAC
TGGGCTTCGA ACCTCGCCAT GAAGCACGCC GTCCGCGGGT TATCGTGCCA GCCCGATCAT
CTGCTGATTG ACGCGATGAA ACTCGACCTC GACTGCGCCC AAACGCCGAT CATCCATGGC
GACGCGCTCT CCGCCTCCAT CGCCGCCGCC TCCATCATCG CCAAGGTCCA CCGCGACGCC
CTCATCCGCG AATGGGCGCC GATCTTCCCC GAATACGATC TCGCCAGCAA CAAAGGCTAC
AGCGCGCCCA AGCACATCAA GGCGCTGCGC GAGTTCGGCC CATCGCCGCT GCATCGGCAA
TCGTTCGCGC CGGTGTGGAT GGCCTCCGCC CCGCAAGAAG TCCTGGAATT TATGTTGGAA
GAGACGGCCG ACACCGCCGT CCCACCGGAA GTTCTCGAAG ACTAG
 
Protein sequence
MVRPKKKPVL GKDGKPLSAA AAKLRLLKRL KCTTKYEKLA ADSGAKLIAG IDEVGRGALF 
GPVVAAAVIL DPNYRIKGLR DSKLLPAETR EILSKRIREH CIAWSIAAVD VARIDQLNIY
WASNLAMKHA VRGLSCQPDH LLIDAMKLDL DCAQTPIIHG DALSASIAAA SIIAKVHRDA
LIREWAPIFP EYDLASNKGY SAPKHIKALR EFGPSPLHRQ SFAPVWMASA PQEVLEFMLE
ETADTAVPPE VLED