Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2854 |
Symbol | |
ID | 4070373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 3393342 |
End bp | 3395132 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637984872 |
Product | amidase |
Protein accession | YP_591929 |
Protein GI | 94969881 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAAAT CTCGCCGCGA CTTCCTAACG CAAACTTCGC TCGCCGTCAT CGGCGCTGCC GTTGCCTCGT CCGCACAACA ACCGACGGAA CCGACACCCG GGGCGCCACC GGCATTTGGG ACGGCGCCGC CGGTGGGGCC GGAGGTCTCG GCGGAGACGT TCGCTCAGGC CGAGAAGCTG GTGCAGGTGC AGATGTCGGC GGAACAACGC GCCCAGGCCG CAAGCAACTG GCGGATGTCG ATGGCCGCGA TGTACGAGCG TCGCGTGGGC CCGAAGAGGA CAGCGCTGGA AGACACGCTA CCGCCGGCGA CGCACTGGAA CCCGATGATC GCGGGCGTGC AGCCGGGGCC GACGCGCGAT GTGTTCGTGC GGAGCCAAGC CGACCCCGGG CCGCTTCCGA CGAGCGACGA AGAGATTGCA TTCGCGCCGG TAACGAAGCT ATCGAGGTGG ATCGAGCAGC GGAAGCTGAC TTCCGAGCGC CTGACCAGGC TCTACCTCTC GCGACTGGAG AAGTTCACTC CCAAGCTTAA GTGCGTGATC ACACTGACCA CAGACTTGGC AATGAAGCAG GCGCAAGCCG CGGACAAGGA GATCGCGGCG GGCAAGTATC GCGGGCCACT GCACGGCATT CCGTGGGGCG CGAAAGATCT GCTCGACACG GCGCACATCC GCACAACGTA CGGCGCCGAG CCGTTCCGCA ACCGTGTTCC CAGTGCAGAC GCGACCGTGG TGAAGCGGCT GCATGACGCC GGAGCAGTGC TGGTGGCCAA GCTCAGCCTC GGCGCGCTGG CTCTCAACGA CGTTTGGTTT GGTGGGCAGA CGGTGAATCC GTGGCTGCCG GAGGAAGGGG CTTCGGGATC GAGTGCGGGG CCGGGTGCGG CGACGGCGGC GGGACTGGTC GGCTTTGCCA TTGGGAGCGA AACCGGAGGC AGCATCGTGG CGCCGTCGAT GCGCTGCGGC GTTACGGGAT TGCGTCCGAC TTACGGCCGT GTGGCGCGTA CCGGTGCGAT GACGCTCTGC TGGTCGCTCG ACAAGCTTGG GCCGATGACG CGCAGCGTAG AAGATGCGGT GCTGGTGCTG CAAACCATCA GCGGGCCGGA TGCGGAGGAT GTGGCCAGCG TGCCGAGTCA TCTTGATTTC GACGCAGGTG CCGCTGTCAC TGGGCTGAAG GTCGGTTACT TCCCTGCATG GATGAAGGAA GCTCCGGCGA CCGACGTGGA TCGCGCTGCA CTCGAAACCG TGAAGAAGCT TGGCATGGCG GCAGTCGAAG TATCGCTTCC CGATTGGAAT TACGACTGTC TCGACACCAT TCTCTTTGCC GAGAGCGCCG CGGCCTTCGA AGAACTGACC CTCAGCGGCG CCGTAGATGC GCTCAAAATG CAGACGCCGG ATTCCTGGCC GAATACTTTC CGGCAGTCGC GATTCTTGTC TGCCGTGGAT TTCGTACAAG CCGACCGCAT GCGGCGGAAG GTCGCGATGG AGATGGCCCG CGTGATGTCC GAGGTGGATT TGCTGCTGGT GCCTTCCCTG CGCGACGAGA TGCTCACGCT CACCAACTTC ACCGGACATC CCTCGCTCAC ATTGCGAGCG GGATTTGTGG AAGTCGGCGA AGCGCGCAGC GACTGGGCGC CGGACCCGAA GCATCCGTTG CCGAAGTTCA ATCCGCCGCG ACGGGTGCCG CATGGGGTGA CCTTAATCGG CCGGCTGTTC GATGAAGGGA CGCTGGGGAG AGTCGGGATC GCGATGGAGA AGGCATTTGG GGTGGAGGAG AGGCCTAACG GGTACGCGTA G
|
Protein sequence | MSKSRRDFLT QTSLAVIGAA VASSAQQPTE PTPGAPPAFG TAPPVGPEVS AETFAQAEKL VQVQMSAEQR AQAASNWRMS MAAMYERRVG PKRTALEDTL PPATHWNPMI AGVQPGPTRD VFVRSQADPG PLPTSDEEIA FAPVTKLSRW IEQRKLTSER LTRLYLSRLE KFTPKLKCVI TLTTDLAMKQ AQAADKEIAA GKYRGPLHGI PWGAKDLLDT AHIRTTYGAE PFRNRVPSAD ATVVKRLHDA GAVLVAKLSL GALALNDVWF GGQTVNPWLP EEGASGSSAG PGAATAAGLV GFAIGSETGG SIVAPSMRCG VTGLRPTYGR VARTGAMTLC WSLDKLGPMT RSVEDAVLVL QTISGPDAED VASVPSHLDF DAGAAVTGLK VGYFPAWMKE APATDVDRAA LETVKKLGMA AVEVSLPDWN YDCLDTILFA ESAAAFEELT LSGAVDALKM QTPDSWPNTF RQSRFLSAVD FVQADRMRRK VAMEMARVMS EVDLLLVPSL RDEMLTLTNF TGHPSLTLRA GFVEVGEARS DWAPDPKHPL PKFNPPRRVP HGVTLIGRLF DEGTLGRVGI AMEKAFGVEE RPNGYA
|
| |