| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2689 |
|---|
| Symbol | aspA |
|---|
| ID | 4071591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 3176872 |
|---|
| End bp | 3178302 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637984706 |
|---|
| Product | aspartate ammonia-lyase |
|---|
| Protein accession | YP_591764 |
|---|
| Protein GI | 94969716 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1027] Aspartate ammonia-lyase |
|---|
| TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0392115 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACTC GGCAGGAGAA GGATTCGCTG GGATATAAGG ACGTTCCGGC GGACGCGTAC
TACGGGATCC AGACGGCGCG GGCGGTGGAG AACTATCCCA TCAGCGGGAT GCGGGCGCAT
GCGACGTTGA TCCGCGCGAT TGCCATGGTG AAGCAGGCGG CGGCTGAGGC GAACCTGGAA
CTGGATCTGA TTGATGCGCG GGTCGCCGAG GCGCTCATTC TCGCGGCGAA GGAAATGCAG
GAGGGCCGCT GGGACGATCA GTTTGTCGTG GACGTATTCC AGGCGGGCGC GGGCGTGAGC
TTCCACATAA ATGCGAACGA GGTGATTGCG AACCGCGCTG AGGAACTCAC GGGCGGAAAG
CTGGGCGAGT ACAAGATTGT GCATCCGAAT GATCACGTGA ATTACGGGCA GTCAACCAAT
GACGTCTTCC CTACCGCGAT GCGCCTCGCG ACGCTGCTGG AGTTGGAGAA ACTGTATCCG
GTGCTCGATG GACTGGCGTC GGCGTTCGGG GCGAAGGGCA AAGAGTTTCA CGACATCCTG
AAGTCGGGAC GCACGCATAT GCAGGATGCG GTGCCGATGC GACTGGGGCA AGAGTTTGCG
GCGTACGCAG GTGCAGTGAG ACGCGCCGAG AAGTCGGTGC GTGAGCAATC GGAACTTTTG
CGTGAATTGG GACTCGGTGG ATCGGCAGTG GGAACGGGGA TCAATACCCA TCCCGAGTAT
CGCGAGAAGG CGATTCGCAA TCTGGCGCGG ATTTCGGGAC AGAAACTGGT GGTGGCGGAT
GATATGCGCT ACGCGATGCA GTCGAACCTG GCGATGGCGA GTGTGAGTTC GGCCCTGCGA
AATCTGTCGC TGGAGATCAT TCGCATCAGT AACGACCTGC GATTGATTGC GTCGGGACCT
AACACTGGAC TGGCCGAGAT CAATTTGCCG GCGCTGCAGC CGGGCTCGTC AATTATGCCG
GGCAAGATCA ATCCGGTGAT GCCGGAATTG GCGGCGATGG TGTGCTTCCA GGTGATTGGC
AACGACACGG CAGTGGCGTT CGCGGTGCAG GCTGGTCAAC TTGAATTGAA CGTGATGATG
CCGACCATGG CGTACAGCGT GCTGCAATCG GTCACGATCC TGACGAACAT GGTGCGGGTG
TTCACGGAGA AGTGCGTTAT CGGAATCACT GCAAACGCTA AGCGCAATGA GATGTACGCA
CAGAGCACGG TGTCGCTGGC GACGGCGTTG AATCCGTATA TCGGCTATGC GAAGGCGGCG
GAGATCGCGA AAGAATCGGT TGCGACCGGC AGGACGATCA TCGAGATTGC ACGAGAGAAG
AAGTACCTGA GCGAAGAGCA GATCAAAGAG ATCCTTGATC CAGCGCAAAT GACGGAGCCC
CGTCTGCCAT CGGAGGCAGC GAAGGATCGC GACAAGATCA AGTTACGCTG A
|
|---|
| Protein sequence | MATRQEKDSL GYKDVPADAY YGIQTARAVE NYPISGMRAH ATLIRAIAMV KQAAAEANLE
LDLIDARVAE ALILAAKEMQ EGRWDDQFVV DVFQAGAGVS FHINANEVIA NRAEELTGGK
LGEYKIVHPN DHVNYGQSTN DVFPTAMRLA TLLELEKLYP VLDGLASAFG AKGKEFHDIL
KSGRTHMQDA VPMRLGQEFA AYAGAVRRAE KSVREQSELL RELGLGGSAV GTGINTHPEY
REKAIRNLAR ISGQKLVVAD DMRYAMQSNL AMASVSSALR NLSLEIIRIS NDLRLIASGP
NTGLAEINLP ALQPGSSIMP GKINPVMPEL AAMVCFQVIG NDTAVAFAVQ AGQLELNVMM
PTMAYSVLQS VTILTNMVRV FTEKCVIGIT ANAKRNEMYA QSTVSLATAL NPYIGYAKAA
EIAKESVATG RTIIEIAREK KYLSEEQIKE ILDPAQMTEP RLPSEAAKDR DKIKLR
|
|---|
| |