Gene Acid345_2616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2616 
Symbol 
ID4072025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3086210 
End bp3087310 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content60% 
IMG OID637984633 
Productbeta-lactamase 
Protein accessionYP_591691 
Protein GI94969643 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.763267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAGA TACCGCTCGA ACCCGCCTAC GCTGACCAGG AGAAGCAGTT CGCCCGAGCC 
TTCGCGATCC TCCGCGCTGG CATCGGCGAA CACGTCATGC CCGGCGCGAC GATCGCCGTC
ACACACGGCG GCAGAATGAT GGCGTGGGAA GCCTTCGGAC GTTTCACCTA CGACCCAGAA
TCGCCCTTGG TACGTCGTGA GACGATCTTC GATCTGGCAT CGGTAACCAA GGCCGTTGCG
ACGACCACAA TCGCCGCCAT TCTGCACGAA CGCGGCCAAC TCAACCTGAA CCAGAAAGTT
CACGAACACT TCCGCGAGTT CCGCGATGGC GGCAAATCGG ATGTAACTAT CGCAATGTTG
CTCTCGCACA GCTCCGGACT GCCGTCCTAC GAAAAGCTCT TCCAGCGTTG TCGATCGCGC
GAGGACCTAC TTGGATCTGC GGCCGCAGCG CCGCTTGCGT ATCCGCCCGG CGCGCGCAGT
GAATACAGCG ATCTCGCCTT CATCCTGCTC GGCGAAATTC TTACGCGGAT CGCCGGTGAG
GACCTCGACG GTTTCGCTGC CCGCGAAATC TTCGCTCCTC TCGGAATGAC AACTGCCGAG
TACTGCCCTG CTCCGGAGGG TCGCCAGGAA ATTCCGCCCG CGCAGGACGA TCGCGAATTC
CGCCACCGCA CCATTCAGGG CGAAATAGAC GACGAAAATG CAAGCGTGAT GGGCGGCGTC
GCCGGACACG CCGGTCTCTT CGCCAACGCT TATGATCTCG CGCTCTTCGC CGAATGCATG
TTGCGCGGAG GTGCGCCAAT CCTGAAGCCC GAGACAGTTC AGCTCTTCAC AAATCGTCGC
GCCGCGCCCT ACGGAACCAG CTTCTCGCTC GGCTGGGACA CACCTTCCCA GCCATCGCAA
TCTGGCACGA AACTTTCCGC GCGCGCCTTC GGGCACCTCG GCTTCACCGG CACTTCTCTT
TGGATCGATC CTGTAAAGCA GCTTTCGATC ACGCTGCTCA CCAACCGCAC CTGGCCGCAT
CGGCAATCGC AGGCAATCAA GCAACTTCGG CCCGCGGTGC ATGATGCTAT TGTGGAAGCA
ATACCTCACG ATGAGATATA A
 
Protein sequence
MPQIPLEPAY ADQEKQFARA FAILRAGIGE HVMPGATIAV THGGRMMAWE AFGRFTYDPE 
SPLVRRETIF DLASVTKAVA TTTIAAILHE RGQLNLNQKV HEHFREFRDG GKSDVTIAML
LSHSSGLPSY EKLFQRCRSR EDLLGSAAAA PLAYPPGARS EYSDLAFILL GEILTRIAGE
DLDGFAAREI FAPLGMTTAE YCPAPEGRQE IPPAQDDREF RHRTIQGEID DENASVMGGV
AGHAGLFANA YDLALFAECM LRGGAPILKP ETVQLFTNRR AAPYGTSFSL GWDTPSQPSQ
SGTKLSARAF GHLGFTGTSL WIDPVKQLSI TLLTNRTWPH RQSQAIKQLR PAVHDAIVEA
IPHDEI