| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2555 |
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| Symbol | |
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| ID | 4072199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 3016823 |
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| End bp | 3019009 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637984572 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_591630 |
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| Protein GI | 94969582 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCGA CTGCGACGAA AACGGCTTCC AATGCGGGAA AAATCTGGAT CCAAAGCCCT
GCGATTGACT TGATCGTAGG ATGCGGAGCG TGGTCGGCGC CACTGTTGTT GGTGTCGTAC
CTGGCGCTCT CGTCTCATGT GGCGACTTGG GCCATCGTAT TTTATGCGCT CGCCCTCTTC
TTTAACTACC CGCATTACAT GGCGACAATC TACCGTGCCT ACCATACGGC CGAAGATTTC
CAGAAGTATC GGATCTTCAC CGTGCACATC ACGGGTTTGC TACTCCTTAC GGCGCTGCTC
TCGCACTTTT ACGTGCGGAT GCTGCCATGG ATTTTCACCC TCTACCTGAC CGCCAGTCCC
TGGCATTACA GCGGGCAAAA TTACGGTTTG TTCATGATGT TTGCGCGCCG GGCCGGTGCT
TCGCCGAGCG GACGCGAGCG GTGGTCGCTT TACTCGGTTT TCCTGCTGAC ATATGCAATT
CTCTTCCTGA ATCTGCACGC TGGCCCTTCC ACTGATCAGC TTTTCGTTTC ACTGAACCTG
CCAATTCTGT TTGTGCGCTG GGCGACGATC GCGCTGACCT TTGTCTGCAT TGGGCTCTCG
GCGTATGGCC TGAACGCATT GCGTCGGCAA ATTGGCCCCA AAGCCATGCT GCCTTCGGTC
ACGTTGCTCT CCACACAGTT CCTCTGGTTC CTCATTCCCA GTTTGCTCGC AGCTTCGGGA
CGCTTGGTGC TCCCGCAAAG CCGATACAGT ACTGGCGTGC TCGCGGTGAT GCACTCCGCT
CAATATTTGT GGATCACCAG CTACTACGCC AAGCGTGAAG CCACCACCGC GACGGCAAAG
TGGCGGCCTG TCGCGTACTT TGCTGTGCTG ATCGCTGGCG GCATCGCATT GTTCATTCCC
GGACCATGGT TGGCCAGCTA CGCCTTCCAC TTCGACTTCA CCAGCAGCTT CTTGATCTTC
ACAGCGTTAG TAAACCTCCA TCACTTCATC CTCGATGGCG CTATCTGGAA GTTGCGCGAC
GGGCGAATCG CTGGATTGCT CCTGAACGCG CCCGCGAAGT TCGCGAAAGC TGCCGGCGAT
ACCAGCGGAG CTCTCCTGCG TTTCAGCCGC TGGACGATTG GCCCAAGTAC CGGCGCGCTC
GCTCTGCGCG TCGGAATGAT CTGCGGCTTG GTTGGGCTCG CGGTCCTCGA CCAGACACGC
TTCGTGCTTG GAATGAGCGT CGAACATCCG ACGCGCCTGC AACGCGCAGC GTCGCTAAAC
CCGTACGACG CATCCGTTCA GTTGCGCATC GCGAAGGACG CGGCTGGTGC GGGTGACAAG
GATGCCGCCT TGCTGGCGTT CAAGAATGCA CAGAGCGCTC GCCCGAACGA CACCTCCATC
CGCGACCAGT ATTTGCGCTT TCTCCTCGCG CAGCAGATGT ATCCCGAAGC GTTTCAACTC
ACGACAGAAT GGCTCGCGCG AACTCCGAAT GACGCGGACT TGCTCGTGAA TCGGGGAATC
CTCGCGAACT ATGTAGGCAA TTCCGAAGCA GCCCATGCGA GTTGGGAGCA GGCGCTGAAG
GTGGATCCTC GCCAGTGGAA CGCGCACTTA TATCTGGCGG AGCTCTTGCA GAGTGAGGGC
AAACCGGCAG AGGCGCTCCA GCACTTCCGC GTGTATTTCG ATTCTGTTGC CTCGCTGAAA
CCCGCAAACC GGCCAACCGC TGATGTCGTC GTCGGCGCCC TGATTCACAT GGCGGGTTGC
ATGTCGGATA CCGGCGACCA GTTTCACGCC ATTCGCAGCT ATGACACCGC AGAGCGTATC
GCGCGTGAAT CTGGAGACAA GCGGTTGCAA AGCCTCGTCG CGAGCAGCGC GGCAGATTTT
CGCGATAAGC ACGGCAGTTT CTCTGAAGCA CTGCGCCTGT TCCAGCAAGC GCTACGAATC
GATAGCTCGA TTCCTTCGGC GGAGCTCGAA GCCAGGGACT TAATCAGCTA CGCGGAACTC
TTGCGCGAGC ACCACTTGGA AAACCTCGCT TACGCCTGCC TGCTGCGCGC ACATCTTTTG
ATGGAAGGAA ATCAGGGAGT TCCGGAATTC GCGCGCGTCG AGAACAGCTT GAAAGAGTTG
GAAAAAACCA GCGACGCCAA GCAGATCGCC GAAGTACAGC ACGATCCAGA TCGCGTCCTG
GCGCAGGCAT TGAATCTTCT GAACTGA
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| Protein sequence | MPATATKTAS NAGKIWIQSP AIDLIVGCGA WSAPLLLVSY LALSSHVATW AIVFYALALF
FNYPHYMATI YRAYHTAEDF QKYRIFTVHI TGLLLLTALL SHFYVRMLPW IFTLYLTASP
WHYSGQNYGL FMMFARRAGA SPSGRERWSL YSVFLLTYAI LFLNLHAGPS TDQLFVSLNL
PILFVRWATI ALTFVCIGLS AYGLNALRRQ IGPKAMLPSV TLLSTQFLWF LIPSLLAASG
RLVLPQSRYS TGVLAVMHSA QYLWITSYYA KREATTATAK WRPVAYFAVL IAGGIALFIP
GPWLASYAFH FDFTSSFLIF TALVNLHHFI LDGAIWKLRD GRIAGLLLNA PAKFAKAAGD
TSGALLRFSR WTIGPSTGAL ALRVGMICGL VGLAVLDQTR FVLGMSVEHP TRLQRAASLN
PYDASVQLRI AKDAAGAGDK DAALLAFKNA QSARPNDTSI RDQYLRFLLA QQMYPEAFQL
TTEWLARTPN DADLLVNRGI LANYVGNSEA AHASWEQALK VDPRQWNAHL YLAELLQSEG
KPAEALQHFR VYFDSVASLK PANRPTADVV VGALIHMAGC MSDTGDQFHA IRSYDTAERI
ARESGDKRLQ SLVASSAADF RDKHGSFSEA LRLFQQALRI DSSIPSAELE ARDLISYAEL
LREHHLENLA YACLLRAHLL MEGNQGVPEF ARVENSLKEL EKTSDAKQIA EVQHDPDRVL
AQALNLLN
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