| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2528 |
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| Symbol | |
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| ID | 4072172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 2984787 |
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| End bp | 2986394 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637984545 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_591603 |
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| Protein GI | 94969555 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.652305 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATTTTC GCCGCGGCCT CATTCTCGTT TTCTGCTGTT TGCTGCTGAG CCTTACTGCT
GTTGCCCAGG CACACGCGGG GGCACAAACG CTCCTCGTCC TCCCCTTCGA CAACGCATCC
CGCGCCCCAG GCCTCGAATG GATCAGCGAG TCCTTCCCTG AGTTGCTCGG TCAGCGCATG
GCCTCCCCCT CAACCTATGT CATTAGCCGT GACGAACGCC TGCTCGCCTT CGACCGCTTC
GGCATCCCTC AAACCCTTCA TCCTTCCCTC GCCACGCTCT ATCGCATGGC CGAGCAAATG
GACGCCGACT ACGTCGTTAT CGGCCACTAC ACGTTCGACG GCAACACTTT CACCGCAAAT
GCGCAGCTTC TCGACATGAA GTCACTGAAG TTGGAGCCAT CCGTCACCGC TAGCGGCCCG
CTCACCACGC TGATGAATAT CCAGAGCACC CTCGCATGGG ACCTGATCGG CGAAATGCAA
AGGCAGCCGA CTGGCTCGAA GGACGAGTTC CTCCGCGCCT CCTCCGGCAT TCGACTCGAC
GCCTTCGAAA ACTACGTTCG TGGCATCACC GCCGGCACCC GCCAGGAGAA GATCAATCGC
CTGCGCGAGG CCAACCGCCT CAGCCCGAAT TACACCCGCG CCACGCTCGC GCTCGGCAAG
GCTTATCTCG ACAATCGCGA CTACGATCAG GCCGTCAACT GGCTCTCGCG AATTCCAAAA
AACGATCCGC TCGCAAATGA AGCCAGTTTC GATATCGGCA TCGCGGCCTT TTATCGTGGC
GACTTCGAAC GCTCCGCTGA GGCCTTCAAT TTCCTGCTGA CCCGTTTGCC CATGCCCGCG
ATCTACAACA ACCTTGGTGT CATCGCCGCC CGGCGCGGCC GGAAAACCGA AGCAGACCTG
CTGCAGAAAG CTGTCGCTGC CGATCCCACC GACGCCGACT ACCGTTTCAA CCTCTCTGTT
GCGCTCGCCC GTGGCGGCGA CAACGCCGGC GCAGTGCGAC AACTTCGCGA CGCCCAAAAG
ACCCATCCCG ACGACGCAGA GATCAAGTCT CTTCTGGATC AGCTTCAAGG CGCGGCAGTC
TCCAACGTTT CGCACACCCA GGCAGCGCAG CTCAAACTCC CTATGGAGCG CCTGAAACGC
ACCTACGACG AAACTTCGTA TCAGCAAGTG GCCATGGAAA TCGAGAACGT CGCTGAGCAG
CGCCTCGCGC AGGCCGATCC CAAGACTCAC GCTGCCTACC ATCTCGAACG CGGACGCGAT
CTGTTGAACC AGGGCTTCGC CGCGCAAGCC GAAAAACAAT TCCGCGAGGC GTTGCAATAC
GATCCAAACA ATGCCGTTGG TCATGCAGGC TTGGCACGCT CGCTTGAATC GAGCGACCCG
GCGGCCTCCG CGCGCGAAGC CGACGCATCC CTCAAACTCC AGTCGAATGT CGACGCCTAC
CTAGTCGTGG CACGCTTGGC CGTCGCCCGC AAAGACACCC GCAAAGCGAA TGACGCTGTC
GATTCGGCCT TGAAACTTGA GCCTGCGAAT TCCGCCGCAC TGGCACTCAA ACGAAGCATA
GAATCAAAGG CGGGTCAGGC CCCGCCATCC GGCAGCACGC CGGAGTAG
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| Protein sequence | MNFRRGLILV FCCLLLSLTA VAQAHAGAQT LLVLPFDNAS RAPGLEWISE SFPELLGQRM
ASPSTYVISR DERLLAFDRF GIPQTLHPSL ATLYRMAEQM DADYVVIGHY TFDGNTFTAN
AQLLDMKSLK LEPSVTASGP LTTLMNIQST LAWDLIGEMQ RQPTGSKDEF LRASSGIRLD
AFENYVRGIT AGTRQEKINR LREANRLSPN YTRATLALGK AYLDNRDYDQ AVNWLSRIPK
NDPLANEASF DIGIAAFYRG DFERSAEAFN FLLTRLPMPA IYNNLGVIAA RRGRKTEADL
LQKAVAADPT DADYRFNLSV ALARGGDNAG AVRQLRDAQK THPDDAEIKS LLDQLQGAAV
SNVSHTQAAQ LKLPMERLKR TYDETSYQQV AMEIENVAEQ RLAQADPKTH AAYHLERGRD
LLNQGFAAQA EKQFREALQY DPNNAVGHAG LARSLESSDP AASAREADAS LKLQSNVDAY
LVVARLAVAR KDTRKANDAV DSALKLEPAN SAALALKRSI ESKAGQAPPS GSTPE
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