| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2522 |
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| Symbol | |
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| ID | 4069891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 2977784 |
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| End bp | 2979643 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637984539 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_591597 |
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| Protein GI | 94969549 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.417958 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGACAG CTCTTTGGGG TGCGATTCTA CTGGCTGCCG CGAGCGTCGC GGCACAGGAC
CTGCCGTCTC CGAATACACC GGCGGTTGAG GCCAAGGTGC CGTCGCAGAA AGCGGAAAAG
CCCTCGAAGA GCGAAGAAAA ACAGGCGAAA CACGAGTTCT CAGAAGGGAT GAAGCGGCAA
AAGGCCGGAG ACTTGCAGCA GGCCTACGAA CATTTCGAAG CCGCTTCCCG TCTGCTGCCG
AAAAATGTTG AATACGCCAC TGCCCGCGAA CTTACGAAAC AACAAGCGGT AATGCAGTTC
ATTCAGCGCG GCAACACCGC GATGGAAAAG GGCCTGACTA TCGAAGCCCA AGGCGACTAT
CGCATGGCGC TGCAGATCGA CCCCGACAAC AACTTCGCGC AGCAGCAGCT CAAGAACGCG
CTCCCCGCGC TCCCATCAAC CGGTTCTCAG ATCCGCTTCA GCGATTCGAC TGACGATGCC
GAGTATCGCG CGCCGGTCAT GCTTGCTCCC GAAAAGGTAA AGAAGGACTT CCACTATCGT
GGCGACTCGA AGGGTCTGCT CACGCAGGTG ATGCAAGCCT ACGGCGTGAC CGCCACGCTG
GATGATTCCG TGCCCTCGAA GCGAGTCCGC TTCGACTTGG ATGCGACGGA TTTCGAGCAT
GCCACCGAGG CCGCAGGCAC CATCACGAAA ACTTTTTGGG TGCCACTTGG ACTGCGCCAA
GTCTTGGTAC TCGCCGACAC GCCGGCAAAC CGTCGCGACA ACCAGCACAT GGTTCTGCGC
ACCTTTTACT TCCCTGACGC GACCACGCCG ACCGACCTTC AGGACCTGAT TAACGTCTTC
CGCGTGATCT TCGACGTCCG CTTTGTGGTG CCGCAACCCA GCAGGAACAG CATTACGGTG
CGGGCCCCGC AGCCTACCAT GGAAGCCGTT ACCCAGTTCT TTTCCGATCT CGACGCCTCC
CGTCCGCAAG TTGCGCTGGA TGTCAGCGTC TATCGCGTAA GCGGTACCCT GACCCACCAG
TTAGGAGTTC AGCCGCCGAA TCAATTCACG ACGTTTAACC TCGGCAGCGT GCTCGCAGGA
CTCGGCGCCA CGAATTTGCA GTCGCTAATC AATCAGATCA TTTCTTCCGG CGCGATCAAC
CAGGCGAACG GTACCGACAT CTCGGCGCTT ATCACACAAG CCCTCGGCAA CACGCAACTG
GCCACGCTTT TCCAGACGCC GTTCGTTACC TACGGCGGAG GCCTGACGCT GATGGCACTC
ACCGTGCCCG GCACCACGCT CAATCTCAAC TTCAGTAAGG CGAATTTCCA GAACCTCGCG
CACATGCAGT TGCGAGCATC GCAGAACAAC GCGGCAACCA TGCGTATCGG TGAGCGTTAC
CCGATTCTGA ACGCGACCTT TGCGCCGATC TACAACACTC CACAAATCAG TGCTCTGTTG
CGGACGGGAA CCTACGTAGC ACCCTTCCCA TCGTTCAATT ACGAGGACCT CGGTTTGACG
GTGAAAGCCA CGCCCTCGAT CCAAGGCAAT CGCGACGTGC GCCTCAACCT CGAGATGCAG
ATGCGCTCGC TCGGCGCCGG AACCAGCAAC GGCATGCCGA TCATCAACAA CCAGGAATAC
AAGGGCACGA TCTCATTGAA AGACGGCGAG CCGGGCGTCG TCGTGAGCTA TTTGACGGAG
AGCGAATCGC GATCCATCTC CGGTATACCA GGCTTAGGTC AAATCCCCGG ACTCGGTTCG
GCCGTGGCAA GCACCGATCG CGAGGGCGTG GAATCCGAGC TACTCGTCAT CATCACGCCT
CACGTGCTCA AGGTCATCGA GCCCAAGATG GATACGATCG CCATGCCCCG GGGCACCTAG
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| Protein sequence | MRTALWGAIL LAAASVAAQD LPSPNTPAVE AKVPSQKAEK PSKSEEKQAK HEFSEGMKRQ
KAGDLQQAYE HFEAASRLLP KNVEYATARE LTKQQAVMQF IQRGNTAMEK GLTIEAQGDY
RMALQIDPDN NFAQQQLKNA LPALPSTGSQ IRFSDSTDDA EYRAPVMLAP EKVKKDFHYR
GDSKGLLTQV MQAYGVTATL DDSVPSKRVR FDLDATDFEH ATEAAGTITK TFWVPLGLRQ
VLVLADTPAN RRDNQHMVLR TFYFPDATTP TDLQDLINVF RVIFDVRFVV PQPSRNSITV
RAPQPTMEAV TQFFSDLDAS RPQVALDVSV YRVSGTLTHQ LGVQPPNQFT TFNLGSVLAG
LGATNLQSLI NQIISSGAIN QANGTDISAL ITQALGNTQL ATLFQTPFVT YGGGLTLMAL
TVPGTTLNLN FSKANFQNLA HMQLRASQNN AATMRIGERY PILNATFAPI YNTPQISALL
RTGTYVAPFP SFNYEDLGLT VKATPSIQGN RDVRLNLEMQ MRSLGAGTSN GMPIINNQEY
KGTISLKDGE PGVVVSYLTE SESRSISGIP GLGQIPGLGS AVASTDREGV ESELLVIITP
HVLKVIEPKM DTIAMPRGT
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