Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2432 |
Symbol | |
ID | 4072866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 2871585 |
End bp | 2872607 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637984448 |
Product | hypothetical protein |
Protein accession | YP_591507 |
Protein GI | 94969459 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.750639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.35999 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAAAAG TTCTTGTTCT TTTGATTACG TTGTTCGTCG GCGCGGGCTT CAGCCAGTCG CGTCCGGTCG CTGCCACTCC GCCGTCGCAG GCGCGCCTCA GCACGGTTGC GATGATCGAC CTGCCGGGGC GGCCGGGTTT CGACTCCGTC GCGATCGCCA ATAACCTCGT TGTGATCGCA CATACCGGCG CGAACACGGT GGATGTCTTC GATCCGCAGA AGCGGCGGAT GGTGGCGCAG ATCACGAACA TCGCGCAGCC GCGCGGCATC GCCGTAGATG CGAAAAATAG CCGGTTCTTC GTCGCCTGCG CGAATTCCAC CATCAACGTG GTCTCCTCGC AGGACTGGCA GGTAAAAGAC ACGTTCAGCG TGGACGGTTC GCCGGATGTG ATCGCGCTTT CGCCGGACGG ATTGCGGCTC TACATCGGCG ATAAGATGAA TTCCAGCGTC TCCGCCGTGG ATACGTCGCT GCGGAAGACC ATCGCCACCG CGCAACTCGA CGGCCGGCCC GAGGCCATCG CGGTTGGCGA CGGCAACCTC GCGTACGTTT CCGTACAGGA CGCGGCCGAA GTCGCGAGCA TTGACCCACA AATGAAGGTT GTCGGGCAGT TCAAGCTCCA GGCGTCGCAG CCCACGGCGC TGGTCTTCGA CCCGGGCGCG CACCGGCTCT ATGTCGCGGT ACGTGGAGCG GTTCTGGCTC TGGACGCGGC CAATGGCGCG GAAGTCTCGC GAGTGGCCGC GCCGCGCGGC GTGAGTAGCC TGGATTTCGA CCCCGTTTCA CGGATGTTGT TCGCGGCGGG CGGTGGCTCG GTGGCTTCCT TCAGCGCGAA TGGCGGTGTT CTGCGCGCGG TGGATGAACT TCCCGCGGAT GTGAAGGGCC ATAGCCTGGT GTTCGACGCC AGCCGGGGCT TGTTGTTCCT GCCAGGTGGC CGCGAAGGCC GGTCGAAGAT GCTGATCGTG AGAGACATCA GCGGTGGTGC CGCGCCGAGT GCGGCGCCGG CTGAGGCGTC ACTTCATAAG TAA
|
Protein sequence | MRKVLVLLIT LFVGAGFSQS RPVAATPPSQ ARLSTVAMID LPGRPGFDSV AIANNLVVIA HTGANTVDVF DPQKRRMVAQ ITNIAQPRGI AVDAKNSRFF VACANSTINV VSSQDWQVKD TFSVDGSPDV IALSPDGLRL YIGDKMNSSV SAVDTSLRKT IATAQLDGRP EAIAVGDGNL AYVSVQDAAE VASIDPQMKV VGQFKLQASQ PTALVFDPGA HRLYVAVRGA VLALDAANGA EVSRVAAPRG VSSLDFDPVS RMLFAAGGGS VASFSANGGV LRAVDELPAD VKGHSLVFDA SRGLLFLPGG REGRSKMLIV RDISGGAAPS AAPAEASLHK
|
| |