Gene Acid345_2302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2302 
Symbol 
ID4071456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2728611 
End bp2729303 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content60% 
IMG OID637984318 
Productcytochrome c assembly protein 
Protein accessionYP_591377 
Protein GI94969329 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.267194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.826102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGG CCTTTTTTGT TGCGGCTGCG GCCGCCGTTG CACTTTTAGG GTTCAGCACC 
TGGCAAGGGC TCTACGTCGC GCCAACCGAC GCCTTGCAGG GCGATGTGCA GCGCGTGTTT
TACTACCACG TCCCCTGCGC CTGGGTGGCG GGGCTCTGCT TCTTCTTTAA CTTCTGCGCC
AGCATCTGGT ATTTGATCCG CAAGGATTCA CCGGCCGACG CGTTCGCGCT CGCCTCCGCG
GAAGTGGGTG TCGTGTTCTG CACCATCGTG CTGATCACCG GGCCGCTGTG GGCGCGTCCG
GTGTGGGGCA TCTGGTGGAC ATGGGATCCT CGCCTGACGA GCACATTCGT CCTGTGGCTG
ATCTACTGCA GCTACTTGAT CCTGCGCAAG TTCGCTACTG GCGGACAAGG TGCAGTCCTC
GGCGCAGCGC TGGCGATTTT CGGATTCGTG GATGTCCCGA TCGTCTATGT TTCGATTCGC
ATCTTCCGCA CCCAGCATCC GCAACCAGTG ATCGCGGGCG GCGAGAATTC GGGACTGGAA
GTTCACATGC TTCACGCCTT CCTTTGGAAC CTCTTGGCAT TTACTATTCT CGGCCTGGTG
ATCGTATGGG CGCGTTATAT CGTCCAGCGC ATTGACCAGC AGGTGGACGA AGCCCACAAG
CAGCGTGCGT TGAGCATGGG AGGGAACGCG TGA
 
Protein sequence
MKTAFFVAAA AAVALLGFST WQGLYVAPTD ALQGDVQRVF YYHVPCAWVA GLCFFFNFCA 
SIWYLIRKDS PADAFALASA EVGVVFCTIV LITGPLWARP VWGIWWTWDP RLTSTFVLWL
IYCSYLILRK FATGGQGAVL GAALAIFGFV DVPIVYVSIR IFRTQHPQPV IAGGENSGLE
VHMLHAFLWN LLAFTILGLV IVWARYIVQR IDQQVDEAHK QRALSMGGNA