| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2086 |
|---|
| Symbol | |
|---|
| ID | 4069685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 2500289 |
|---|
| End bp | 2501077 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637984101 |
|---|
| Product | LmbE-like protein |
|---|
| Protein accession | YP_591161 |
|---|
| Protein GI | 94969113 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.689615 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.197926 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCCCC TGGCTCCCCT TTTGAATCGC ACGCTCGTCC TCGTCGCACA TCCTGACGAC
GAATCCATCT CGTGCGGCGC ATTGCTGCAA CGCGTGCGTG AACCCATCGT CGTCTATGCC
ACGGACGGCG GCCCGCAAGA CGAGTACTTC TGGGGCCGCT ACGGTTCGCG CGAGAAGTAC
GTCGCCATCC GGCGCGCCGA AGCTCACGAT GCGTGTGCCG CCGTCGGCGT AAGCGAAGTT
CTCTGGCTCG CCGACGACGC TGGCTGTCAA TTTCAGGACC AGCGTCTCTT CCGAAATCTC
CCCGCTGCCG CCGACGCTCT CCGAAAGCTC GTGAGGCAGC ACACGCCCGA TGTCATCCTC
ACGCTCGCTT ACGAAGGTGG GCACCCCGAC CACGATTCCT GCAACTTCCT CGGCCGCCAA
ATTGCCGACG AATGTTCCCT CCTCGCTTGG GAGGCACCGC TCTACTTCCG CAAAGGCGGC
GACGACATCC TCCTCCAGGA ATTTCACAGC ACCAACGGAA CCGAGATCGA GTTCGTTCCC
ACAGCCGAGG AACTGCGCCG AAAGCGCACC ATGTGCGAAG CCTACGTCTC GCAGCAAGGC
ACGGTCGCCA TCTTCGAAAA CAATCTGCGT GAAACCTTCC GGCCCATGGC GCGCTACGAC
TACAGCCGTC CGCCGCACGA TGGCGTTCTG AACTACGAAG CCTGGCAGTG GCCGATTAAG
GGCCAGCAGG TGGCCGACAA ATTCATGGAG TATCTGCAAG GCGCCCCGCG CGCCGAGAGC
GCTCGCTAG
|
|---|
| Protein sequence | MDPLAPLLNR TLVLVAHPDD ESISCGALLQ RVREPIVVYA TDGGPQDEYF WGRYGSREKY
VAIRRAEAHD ACAAVGVSEV LWLADDAGCQ FQDQRLFRNL PAAADALRKL VRQHTPDVIL
TLAYEGGHPD HDSCNFLGRQ IADECSLLAW EAPLYFRKGG DDILLQEFHS TNGTEIEFVP
TAEELRRKRT MCEAYVSQQG TVAIFENNLR ETFRPMARYD YSRPPHDGVL NYEAWQWPIK
GQQVADKFME YLQGAPRAES AR
|
|---|
| |