Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2043 |
Symbol | |
ID | 4073212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 2446567 |
End bp | 2447418 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637984057 |
Product | prephenate dehydratase |
Protein accession | YP_591118 |
Protein GI | 94969070 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.64689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCCAGA GGGGTTGCGT TGTCTTGTAT CCTTGCACGC AAATGAAAAT TGCGATCCAG GGCGAGTTGG GGGCGTTTAG TCACGAGGCG TGCCGGAGGA ATTTTCCTCG GGCGAAGGTG GTGCCTTGTG CAGTTTCGTC GGAAGTATTT GAGGCGCTCG AGTCGGGGCG TGTGGATGCG GCCTTGATTC CGATCGAGAA CACGCTGGCG GGGCCGGTGG TGGTGCACTA CGACCTGCTG CTCGAGCATG ATTTCTATGT GAACGCGGAG TTCCGGTTGC GGATTGAGCA CCAGCTGCTG GCGGTACCGG GGACGAAGTT TGGCGAGATA CGCGAGGTGC TGTCGCACCC GGTGGCGCTG GACCAGTGCC GGAAGTTTTT TGCGAAGAAC AAGAAGGTAC GGTCAGTGTC GTTTTACGAC ACGGCGGGCG CGGCGCGCCA TGTGATGGAA GAAGGGAAGC ACGAGCAGGC GGCGATTGCG TCGCGGGTGG CCGGCGAGGT GTATGGCGCG GAAGTATTGC AGTCGAACCT GGAAGATGAT GCGCAGAATT TCACGCGGTT CGTTTTGGTG GAACGGCGGG CACGCGCGAA CAAGGATGCG AACAAGGTGT CGGTTGCCGT GGGATTGCCG AACAAGCCTG GGATGCTTTT CAAGGCGTTG AGCGTGTTCG CGCTGCGCGA GATTGATTTG ACGAAGATCG AGTCGCGGCC GGTGCGCGGA AGGCCGTGGG AGTATGCGTT CTTTCTGGAC TTCATGCAGA CGGACAAGAA GGCGGCGGAG AATGCGTTGC GGCATTTGGA AGAGATCGCG CAGTTTGTGA AAGTGTTGGG GAGGTATCGA AGCGCGGAGT AG
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Protein sequence | MLQRGCVVLY PCTQMKIAIQ GELGAFSHEA CRRNFPRAKV VPCAVSSEVF EALESGRVDA ALIPIENTLA GPVVVHYDLL LEHDFYVNAE FRLRIEHQLL AVPGTKFGEI REVLSHPVAL DQCRKFFAKN KKVRSVSFYD TAGAARHVME EGKHEQAAIA SRVAGEVYGA EVLQSNLEDD AQNFTRFVLV ERRARANKDA NKVSVAVGLP NKPGMLFKAL SVFALREIDL TKIESRPVRG RPWEYAFFLD FMQTDKKAAE NALRHLEEIA QFVKVLGRYR SAE
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