Gene Acid345_1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1978 
Symbol 
ID4069364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2371831 
End bp2372190 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content57% 
IMG OID637983991 
Productanti-sigma-factor antagonist 
Protein accessionYP_591053 
Protein GI94969005 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTAT CGCTTAGCAC GCGCACCATC GAGGGCATCA TTATTGTGGA TTGTGCGGGT 
CGGCTGGTGT TTGGCGACGA GTCTGGTGCC CTGCGCGAAA CTGTGAAAAA ACTGATGCCC
GCTTACAAGC AGATCGTCCT CAACATGAAG GGCGTGATGT ACATCGATTC GGGCGGCCTC
GGCACGCTGA TCAGCCTCTA TAGCTCGGTG CGCGCCGGCG GCGGCGAAAT GAAGCTCGCT
AGCCTCAGCG CCAAAACGCT TGAACTGCTC TCCATTACCA AGCTGCTGAC CGTGTTCGAT
ATTCGCGATA CGGAGACAGA CGCGGTGTTG TCGTTTGCGA AGTCGGCAGG AACGCACTAA
 
Protein sequence
MQLSLSTRTI EGIIIVDCAG RLVFGDESGA LRETVKKLMP AYKQIVLNMK GVMYIDSGGL 
GTLISLYSSV RAGGGEMKLA SLSAKTLELL SITKLLTVFD IRDTETDAVL SFAKSAGTH