Gene Acid345_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1860 
Symbol 
ID4069202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2236762 
End bp2237286 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content59% 
IMG OID637983869 
Productsignal peptidase II 
Protein accessionYP_590935 
Protein GI94968887 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGAAGT CTCACGGTAC AACTCGTTCG CTCTACATCG CCACTGCGCT GGCGATCTTC 
CTGCTCGATC GCTGGACGAA GTTCATCGTC GCGCAGAAGA TCTCCCTGTT CGACAGCATC
AGCGTCATTC CGGGGTTCTT CAAGATCACG CACCTGCGCA ACACCGGCGC GGCGTTCAGC
CTATTCGCTG ACGCTCCAGC AGCTTGGCGC ATGGCGACGC TGGTGATCTT CTCGATCGTG
GCGCTCGTAA TCGTGCTCGT CTTGCTGGTG CGGAACAGCC GAGCATTCAC GTGGAACGGC
TTTTCCCTGG CGCTTATCCT CGGCGGAGCG CTGGGAAATT TGTGGGACCG CGTCTTGCAC
GGCTGGGTCA CCGATTTTTT GCTGGTGTAT TACAAACGGT GGGAGTGGCC CGCCTTCAAC
GTTGCGGATA GCGCAATCTG CGTCGGGGCG GTGCTGCTCA TCGCTGAGAT GCTCTTCAAG
CGCGAGCATG CCCCCGCCCA CGACACGCAA CTAGCGAAAG AGTAG
 
Protein sequence
MTKSHGTTRS LYIATALAIF LLDRWTKFIV AQKISLFDSI SVIPGFFKIT HLRNTGAAFS 
LFADAPAAWR MATLVIFSIV ALVIVLVLLV RNSRAFTWNG FSLALILGGA LGNLWDRVLH
GWVTDFLLVY YKRWEWPAFN VADSAICVGA VLLIAEMLFK REHAPAHDTQ LAKE