| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1787 |
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| Symbol | |
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| ID | 4071977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 2167718 |
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| End bp | 2168389 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637983795 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_590862 |
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| Protein GI | 94968814 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.99637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCTT CCCAAGTATT GGACAAAACT CGGCTGTCGG AATGGTCCGA CCAGGAGATC
ATTGAGCGGG TTCTGGCCGG CGATTCCCCG GCCTATGAAC TGCTGATGCG TCGCTACAAT
CAGCGACTAT ACCGGCTGAT CCGCTCAGTG CTCCGCGACG ACGCCGAGGC GGAAGACGTA
ATGCAGGAGG CATACCTCAG GGCCTTTCGC AATCTGAGTC AGTACGAAGG TCGAAGCACG
TTTTCCACCT GGATCGGACA CATCGCCGTG AATGAAGCCT TGGCGCGCCT CTCCAAAGCC
AGCCGCTTGG AATACAAGGA CCTCAACGAT CCCGCGGCTA CCCCTGACAT CGCCGACGTG
GCTCCGACTC CCGAAGCACA GAGCGCTTCT GGCGAAACTC AGCGCCTGCT CGAGCGCGCC
ATTATGACGC TGCCGCTGCG CTATCGCAGC GTGCTCATGA TGCACGATGT GGAAGACATG
ACGACCGCCG ATACCGCCGC CATGCTCGAA CTTACCGAAG CGACGGTGCG CGTCCGGCTG
CATCGCGCTC GCGCGCTGGT CCGCAGAAAA CTCTTCGCAC TGGTTGGAGC CACGAGCACA
TCAGCATTCC AGATCCAGGC CCCGCGCTGC GACCGGGTCG TCGCCAACGT TCTGCGACGC
ATCGCTGAGT GA
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| Protein sequence | MTASQVLDKT RLSEWSDQEI IERVLAGDSP AYELLMRRYN QRLYRLIRSV LRDDAEAEDV
MQEAYLRAFR NLSQYEGRST FSTWIGHIAV NEALARLSKA SRLEYKDLND PAATPDIADV
APTPEAQSAS GETQRLLERA IMTLPLRYRS VLMMHDVEDM TTADTAAMLE LTEATVRVRL
HRARALVRRK LFALVGATST SAFQIQAPRC DRVVANVLRR IAE
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