Gene Acid345_1765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1765 
Symbol 
ID4070645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2140165 
End bp2140506 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content60% 
IMG OID637983773 
Productanti-sigma-factor antagonist 
Protein accessionYP_590840 
Protein GI94968792 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.693934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTTTAA CCTCGAGCAC CCGTGAGAAA AACGGAGTTT TCATTGTGGA CCTTAACGGC 
CGCATCGCCC TGGGCGACGG CAGCGCCGAA CTCCGCGACG CCATCAAGAA CGCAGTCGCC
GCCGGACACC AGAAGGTCCT GCTCAACCTC GCTGGCGTCA GCTACATCGA TAGCTCCGGC
ATCGGTGAAC TGGTCAGCGG TTTCACCTCC GCCCGCACCC GTGGCGCTGA CGTGAAGCTT
TGCAATGTCA CCAACCGCGT CAACGACCTT CTGCTCGTCA CCAAGCTCTA TACCGTCTTC
GACATCAAAG ACACCGAAGA CGCCGGCGTC GGCGCGTTCT AG
 
Protein sequence
MALTSSTREK NGVFIVDLNG RIALGDGSAE LRDAIKNAVA AGHQKVLLNL AGVSYIDSSG 
IGELVSGFTS ARTRGADVKL CNVTNRVNDL LLVTKLYTVF DIKDTEDAGV GAF