| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1745 |
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| Symbol | |
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| ID | 4072012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 2117563 |
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| End bp | 2118444 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637983753 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_590820 |
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| Protein GI | 94968772 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCGCTCG AGTACGCCAT TCCGGCGACG GCGCCTTCGC TCGCCGAAGC GCAGGCCTAT
TGCAAGCGCC TCGCGACCAG CCACTACGAG AACTTTTCCG TCGTCACCTG GTTCCTGCCC
AAACATCTGC ATCAGCAGTT TTTCAACGTC TATGCGTACT GCCGCATCTC CGATGATCTC
GGCGATGAGG TCGGCGACAC CCAGCTCTCG CTGAAATTGC TCGACGAATG GGAGCACGAG
CTCGATGCCT GCTACGATGG CACCCCGCGG CATCCTGTAT TTGTCGCCTT ACGCGAGACC
GTTCGTGAGT TCGAAATTCC AAAGCATGAA TTTTCCGACC TGCTGATCGC TTTTCGCCAG
GACCAGACCA TCACCCGTTT TCCGACCTTC GACGATGTCC TTGCCTACTG CAAGTACTCG
GCAAATCCCG TCGGACATCT CGTGCTTTAC CTCTGTGGCT ACAAAGACGC CGAGCGCCAG
CAGTTTTCCG ACTACACCTG CACCGCGCTG CAACTCGCAA ACTTCTGGCA GGATGTCTCC
GTCGACTATG GCAAGGGCCG CATCTATCTT CCGCTCGACA GCATGCAGAA ATTTGGCGTC
AGTGAAGACG ACATCGCAAA CCGTCGTTCC ACGCCGCAGT TCCTCGAACT GATGAAGTTT
GAAGTCGCCC GTGCGCGCGA GTGGTTCGCC AAAGGCCTGC CGCTGGTGAA GATGGTCAAC
CGCGAACTGG CTCTCGATGT TGAGCTCTTC TCGAATGGCG GCTTGGAAAT TCTGAACGCG
ATCGAGCGGC AAGGTTACGA CGTGCTCAAG TCGCGTCCGG TGATCTCGAA GCCAAAGAAG
CTGTGGCTAG TCCTGCGCGC GGCTGCGGGG AAGCTGCTGT GA
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| Protein sequence | MPLEYAIPAT APSLAEAQAY CKRLATSHYE NFSVVTWFLP KHLHQQFFNV YAYCRISDDL
GDEVGDTQLS LKLLDEWEHE LDACYDGTPR HPVFVALRET VREFEIPKHE FSDLLIAFRQ
DQTITRFPTF DDVLAYCKYS ANPVGHLVLY LCGYKDAERQ QFSDYTCTAL QLANFWQDVS
VDYGKGRIYL PLDSMQKFGV SEDDIANRRS TPQFLELMKF EVARAREWFA KGLPLVKMVN
RELALDVELF SNGGLEILNA IERQGYDVLK SRPVISKPKK LWLVLRAAAG KLL
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