| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1637 |
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| Symbol | |
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| ID | 4072524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 1985793 |
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| End bp | 1986581 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637983646 |
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| Product | sigma 28 |
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| Protein accession | YP_590713 |
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| Protein GI | 94968665 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.195318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGGGCC ACCGTCAAGA CTCAGGAACG GAAGCAACGG GTTGGGAGCA TCGAGACCGT
CTGGTGATGG AGCAGATGTC GCAGGTCAAA TACATCGCGC GCCGGATTCA CGAACGGCTG
CCGCGTCATG TTCCGATTGA AGACCTCATC AACGCAGGAA TTCTCGGCTT GATCGACGCC
GCCGGCAAAT ACGATTCCGA GAAAAATGTG CAATTCCAGT CCTACGCAAA GTTCCGCATC
CGCGGAGCGA TTCTCGACAG CCTGCGCGAC CTGGACTGGA GTCCTCGCGA CTTGCGACGG
AAGGCGCGGG CGCTCGAAGC GGCTGAGCTG CGCTTGACTT CCGAAACGGG ACATCCCCCA
CTGGAAGACG AGTTGGCCCG GGAATTAGGT ATGGATTTGG ACGGCTTTCG CGAGCTCACC
CGCGAGTTGG AAGGCCTTGG CATTTCGAGT CTGCAGGAAG GCCTTCCCGC AGAGGGATTT
GGCGAGGAGC GCGAAGTTGT GGTTGAAAGC CACGAGGAGA GCCCGCTGGA CGCGTTCCTG
CGCAGCGAAA ATCACGAACT GTTAGTGGAA GCGATTGAGC AGCTCCCGGC ACGGGAGAGG
CAAGTGCTGG CGTTGTATTA CTTCGAAGAG CTCACCATGA AAGAGGTAGG TGATGTGCTG
GGCGTGGGCG AATCACGCGT TTCGCAGATT CATTCCCAGG CGCTGACACG GGTTCGAGCT
CGTCTGCAAT CGCGCCACAC CGTCCCGGTG ACCTCGGTGC GCATGGAGAA CTCGTGGATA
AGCTACTAA
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| Protein sequence | MSGHRQDSGT EATGWEHRDR LVMEQMSQVK YIARRIHERL PRHVPIEDLI NAGILGLIDA
AGKYDSEKNV QFQSYAKFRI RGAILDSLRD LDWSPRDLRR KARALEAAEL RLTSETGHPP
LEDELARELG MDLDGFRELT RELEGLGISS LQEGLPAEGF GEEREVVVES HEESPLDAFL
RSENHELLVE AIEQLPARER QVLALYYFEE LTMKEVGDVL GVGESRVSQI HSQALTRVRA
RLQSRHTVPV TSVRMENSWI SY
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