Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1580 |
Symbol | |
ID | 4069018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 1929175 |
End bp | 1930119 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637983589 |
Product | hypothetical protein |
Protein accession | YP_590656 |
Protein GI | 94968608 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.528677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0547488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGAGTG AATTGCACAA TTCGGAACAA GGGCTGAAGC GCCGCTCGTT CCGTGCCGAG AGCGGCTACA TGCTGCTCAT CCTGATGTTC TTTGTTGCCC TGCTCACTTT CAGCTTGATG GCAGTGCTGC CGAAGGTGGT GCAGCAGGTG AAGCGCGACC GCGAAGAAGA GATGATCCAT CGCGGCACCG AGTACGCACG GGCGGTCAAG AAGTTCTACA AGAAGTTCAA TCGCTACCCG AATTCCCTGC AAGATCTCGA GAACACCAAC AACCTTCGGT TCATCCGGCG CCGCTACAAA GACCCGATGA CGAAGGACGG AAACTGGCGG CTCCTGCATA TCACGGATGT CCAACAGGGA GTTGCGAATC CGAACTTTGG GGTGAGCCAG GCGTCGAACT TCAATCCCTT GGGCGGCGGC CCCGGAAGCC AGAATCCGAC GGGAATCGCG CAGGTTCGTC CGGGAGCACA GGGCGGCGAC ACGAGCGGCA ATGCACAGGA CCAACCGACG GTCGGCGTGG CCCCTGACGG GTCGCAAGGG CAAAATCCGC CGGGCGGCAC AGCGACTACC GGTTCAACCA CCGATCCGGG CCAGTCTGGC CAAGCGCTGC AGAACCCCGG TCTCGGCGGG CAGCCCGGGC AGACCTACGG TGCCGGCGGC ATTGTCGGCG TTGCGAGCAT GAGCAAAGGC AAGAGCATCC GCGAGTTCAA CAACAAGTCG AACTACAACA AGTGGATGTT TATCTACGAT CCCACGCAAG ACCGCGGCAT GCTGCTGAAG GGGCCCTACA ATCCTCAGGC GTTTATCGGT GGATCGAATG TCGGCGGTAC TGCACCTGGA GCCATGTCGC CGAATGGAAT GTCGCCGATA GGCACGCAGC AACCGACGCA GCAGAACGGG CCGGGCAATC AAATGCCGCC GGACCAGAAC GCGCCGCCAC AGTAA
|
Protein sequence | MPSELHNSEQ GLKRRSFRAE SGYMLLILMF FVALLTFSLM AVLPKVVQQV KRDREEEMIH RGTEYARAVK KFYKKFNRYP NSLQDLENTN NLRFIRRRYK DPMTKDGNWR LLHITDVQQG VANPNFGVSQ ASNFNPLGGG PGSQNPTGIA QVRPGAQGGD TSGNAQDQPT VGVAPDGSQG QNPPGGTATT GSTTDPGQSG QALQNPGLGG QPGQTYGAGG IVGVASMSKG KSIREFNNKS NYNKWMFIYD PTQDRGMLLK GPYNPQAFIG GSNVGGTAPG AMSPNGMSPI GTQQPTQQNG PGNQMPPDQN APPQ
|
| |