| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1576 |
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| Symbol | |
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| ID | 4069014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1924798 |
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| End bp | 1926438 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637983585 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_590652 |
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| Protein GI | 94968604 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.22471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0615675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAGA ACACAGCAAT TTTCGTCAAC AACGCGACCA CCGCAGCCAA GGAAGAAGAG
CGCGGACGCG ATCTCGCGCG GCGCTATCGC TGCGAGTTCG TGGACCTGAA GTCGTTTCGG
ATGCACCAGG ACCTGTTCCG CAAGATTCCA GTGGAACTGA TGTTTCGCTA TAACTTCATC
CCTCTGGAAG AACTGCCGGA CGGCCGCCTC GAAATCGCGA TCGACGATCC CAGCCGGCTG
ATGATGATTG ACGAAGTCGG TTTGCTGTTG CGGCGCGAGA TCGTGACCAA GGTTTCGACG
CTCTCCCAGA TCACCGACAT CCTGAAGAAG ACGGAGCAGT CGCAGCGCGT TCTGGAAGAG
GCGAGCGAAG ACTTCGCCGT CCACGTTATT CGCGACGACG ACGAGTCCGA CGAAACCATC
TCGATCGAGA AGTTGACGGC GGAAGGGGAC ATGAGCCCCA TCATCCGCCT GGTGGACACG
ACCATCTTTA CCGCGTTGCA ACGGCGTGCG TCCGATATTC ATATCGAGAC GCAAGATGAA
TCCGTGATCA TTAAGTACCG TATTGACGGC GTGCTACAGA AGGCGATGCA ACCGATCGCG
AAGGAACACC ACTCGACGAT CATCTCGCGT ATCAAGGTCA TGAGCGAGTT GGATATAGCC
GAGCGTCGTG TACCGCAGGA CGGGCGCTTC CGCGTACGCT ACCTGGGCCG CCAGATTGAT
TTCCGCGTTT CCATCATGCC GTCTATCCAC GGCGAAGACG CGGTGCTCCG TGTGCTCGAC
AAAGAGAGCA TGAGCGAGAA GTTCCACAAG CTGACGCTTG ATGTGGTCGG GTTCAGCGAG
GACCACATCA AGACGTTTCG CCGGTACATC AACGAGCCGT ACGGCATGGT GCTGGTGACG
GGGCCTACCG GTTCCGGCAA GACGACGACC CTTTACGCTG CGCTGAATGA AATCAAGACG
GAAGAAGACA AGCTGATCAC GATTGAAGAT CCGGTCGAAT ACCAGATCCG CGGCGTTACG
CAGATTCCGG TGAACGAGAA AAAGGGTCTG ACTTTCGCTC GCGGCCTGCG TTCGATTCTG
CGTCACGATC CGGACAAGAT CATGGTCGGC GAAATCCGCG ACACCGAGAC GGCACAAATC
GCGATTCAGT CCGCGCTGAC CGGTCACCTT GTGTTCACGA CAGTCCACGC GAACAACGTG
GTGGACGTAC TGGGGCGGTT CCTGAACATG GGCGTGGAGG CCTACAACTT TGTGTCGGCA
CTGAATTGCA TCCTGGCGCA GCGGTTGGTG CGCGTCATCT GCGACCACTG CAAGCGCAAG
GTGCGCTACG ACCTCGAAAC CCTGGAGAAC AGCGGTCTCA ACCCGGCAGA GTGGGGAGAC
TTTGAATTCA GCGAGGGCCC GGGCTGTATC GAGTGCGCCG GCACCGGGTT CCGCGGCCGA
ACGGCGATCC ATGAACTACT TGAACTGACC GATCGGATTC GCGAAATGAT TCTCGACAAG
AAGCCGAGCT CGGAGATCCG CAAGGCGGCG CGCGAGGACG GCATGATTTT CCTGCGCGAG
TCGGCGCTGG CGAAGCTGCG CGATGGGATC ACGACGCTAC GCGAAATCAA TAAGGTCACG
TTCATCGAGG CCTCGAGATA A
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| Protein sequence | MAENTAIFVN NATTAAKEEE RGRDLARRYR CEFVDLKSFR MHQDLFRKIP VELMFRYNFI
PLEELPDGRL EIAIDDPSRL MMIDEVGLLL RREIVTKVST LSQITDILKK TEQSQRVLEE
ASEDFAVHVI RDDDESDETI SIEKLTAEGD MSPIIRLVDT TIFTALQRRA SDIHIETQDE
SVIIKYRIDG VLQKAMQPIA KEHHSTIISR IKVMSELDIA ERRVPQDGRF RVRYLGRQID
FRVSIMPSIH GEDAVLRVLD KESMSEKFHK LTLDVVGFSE DHIKTFRRYI NEPYGMVLVT
GPTGSGKTTT LYAALNEIKT EEDKLITIED PVEYQIRGVT QIPVNEKKGL TFARGLRSIL
RHDPDKIMVG EIRDTETAQI AIQSALTGHL VFTTVHANNV VDVLGRFLNM GVEAYNFVSA
LNCILAQRLV RVICDHCKRK VRYDLETLEN SGLNPAEWGD FEFSEGPGCI ECAGTGFRGR
TAIHELLELT DRIREMILDK KPSSEIRKAA REDGMIFLRE SALAKLRDGI TTLREINKVT
FIEASR
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