Gene Acid345_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1556 
Symbol 
ID4068665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1903431 
End bp1903793 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content68% 
IMG OID637983565 
Producthydrogenase expression/formation protein HypA 
Protein accessionYP_590632 
Protein GI94968584 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.268583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0306353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACGAAT TAAGCGTGGC GCAGGAGTTG TACACGGTGG CGCGGGCGCG CGCCGATGAG 
ATGGAAGTGC GCGAGCTGGA GAGCGTGCGG GTGGCCGTCG GAGAACTCGC CGGGGTCACC
CCCGACCTCC TCCGCTCAGC CTGGCGGTTT GTGACCGCGG AGAGCGCCGA CGAGAACTCG
CGCCTCGACA TCGATCTGCG TAGCGGACGC CAGATCTGTC CGCAATGCGG GGCCCTGCCG
GGGCCGGACG TGATCGCCTA CCCGGCCCAC TGCGAGCGCT GCAAGTGCCA CATGCGGGTG
GAGAGCGGAG ACCGCGTGGA ACTGCTGGAA ATTCGGTTCC AGCAGGAGCT GGCGCTGGCG
TAG
 
Protein sequence
MYELSVAQEL YTVARARADE MEVRELESVR VAVGELAGVT PDLLRSAWRF VTAESADENS 
RLDIDLRSGR QICPQCGALP GPDVIAYPAH CERCKCHMRV ESGDRVELLE IRFQQELALA