| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1547 |
|---|
| Symbol | |
|---|
| ID | 4072938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 1892614 |
|---|
| End bp | 1893891 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637983556 |
|---|
| Product | DNA-directed DNA polymerase |
|---|
| Protein accession | YP_590623 |
|---|
| Protein GI | 94968575 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.153092 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.161564 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAA TCACGGGTCG AAATTCGGCG GCTGCGGACC CTCGACGCGT CATTTTTCAC
GTCGACATGG ATGCCTTTTT TGTCTCCGTC GAAGAGTTGT TCGACCCTTC CCTCAAGGGG
AAAGCCGTCG TGGTAGGCGG CCATCGCGAC GAGCGTGGTG TCGTCTCAGC GGCCTCGTAT
GCGGCACGCA AGTTCGGCGT ACACTCGGCA ATGCCGCTCC GGACCGCGGC CAAACTCTGT
CCTGACGCCA TCTTCGTGAA CGGACATCCC GAACGCTACC GCGAATATTC CGGCAAAGCT
TTTGAGGTAC TGAAGAAGTT TTCGCCGAAA GTCGAAATGG CTTCCATTGA TGAGGCCTAC
CTCGACATGA CCGGTACCGA GCGCCTGCAC GGGCCGCCGC TCAAGGCCGC GCATGCTCTC
CACCAGTTCA TGAAGTCTGA AACTAAGTTG AACTGCTCCA TCGGCATCGG CACCTCGCGG
CTTATCGCCA AGGTCTGCAG CGACCAGGCC AAGCCCAACG GCGTCCTTTA TATCGTGCCA
GGACAGGAGG CCAGCTTCCT CGCCCCACTA AGCGTGCGTA AAATTCCGGG CGTCGGCAAG
GTCTTCGAAC AGAAGCTCAA TGAAATCGGC ATTAAGAAGG TCGGCGATCT CGCCAAACTC
GATGACGCAT TCCTACGCGA GCGCTTCGGC GAGTGGGGAC TCGCGCTGGC AGGGAAGTCC
CGCGGCCTCG ACGCCGGCGG ATACTTCGAT CGCGATGTCG CGGTGGACGA AGGACCGAAG
TCGATCAGCC ACGAGCATAC CTTCAACACC GACACGCGCG ATCAAGAGAA ACTCGAAGCC
ATGATCGCGC GACTGAGCGA GATGGTCTGC CGCAGGGTGC GCGAGCACGA GCTCCATGCC
CGCACGGTGC AGATCAAGTT GCGCTATTCC GATTTCACCA CCATCACGCG CGCCCACTCA
CTCGAACAGC CCACGCAACT CGATACGGTC GTTGCCGAAA CTGCGCGCAC TCTTTTTCGC
GACAACTGGC AGCGCGGCCG AACCATTCGC CTCATCGGCG TACATGTCGC CGGCTTTGAC
GATGTTCCTC AGCAACTCGA TCTGCTTACT CAGACGCACG ACGACAAAGT CAGCAAAGCT
CTTTCGGTAG TTGATCGAAT GCGCGACAAG TTCGGCGAAA ACGCGGTCTC GCTTGCCACC
GGCCTGAAAT CGCGTTTCCG CGAGAAGACC CACGAGAACC CAGCCAGCCT TCCGGGGAAA
TCGAAGAAGA AAGAATAG
|
|---|
| Protein sequence | MEEITGRNSA AADPRRVIFH VDMDAFFVSV EELFDPSLKG KAVVVGGHRD ERGVVSAASY
AARKFGVHSA MPLRTAAKLC PDAIFVNGHP ERYREYSGKA FEVLKKFSPK VEMASIDEAY
LDMTGTERLH GPPLKAAHAL HQFMKSETKL NCSIGIGTSR LIAKVCSDQA KPNGVLYIVP
GQEASFLAPL SVRKIPGVGK VFEQKLNEIG IKKVGDLAKL DDAFLRERFG EWGLALAGKS
RGLDAGGYFD RDVAVDEGPK SISHEHTFNT DTRDQEKLEA MIARLSEMVC RRVREHELHA
RTVQIKLRYS DFTTITRAHS LEQPTQLDTV VAETARTLFR DNWQRGRTIR LIGVHVAGFD
DVPQQLDLLT QTHDDKVSKA LSVVDRMRDK FGENAVSLAT GLKSRFREKT HENPASLPGK
SKKKE
|
|---|
| |