| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1494 |
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| Symbol | |
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| ID | 4071664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 1816724 |
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| End bp | 1818472 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637983503 |
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| Product | putative GAF sensor protein |
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| Protein accession | YP_590570 |
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| Protein GI | 94968522 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5373] Predicted membrane protein |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.980694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATT CTGTAACAAA GGACTCGGAA TTCGAGATCC AGTATCCGCC CTCAATACTC
GAAGACGTCA CAAAACTCGT TCAACGGGTT CAGACGTTTA CGGGAGCGGC CGGCGCAGCG
ATCGCGCTGC GCGAGGGGGA GGACATGGTT TGCCGCGGCA GCCGCGGCAA CAACGCCCCC
GACGTTGGAA TGGTTCTAAG CACCGACGGA ACGTTCACTG GCCTGGCCGT TACCGGAATG
AAAGCGGTGC GTTGCGACGA CACCGAAAAT GATTCGCGCG TCGACCCCGA AATCAGCCGC
GCCCTCCGCA TCAAGTCGAT GGCCGTAGTG CCCGTACTGA GCGGAATGCG CGTCAGTGGC
GTGATTGCGA CGTTCTCGAG CGCTGCCAGT GCCTTCAGCG ACACTCATAT GGCCGTCCTC
AAGACGATGG CCGATGGCTT GGGCGCTTCG ATCCAGCGCT TCCTGGAAGT CCAGGGAATT
AGCACCGGCG CACCGATGGT CTCCGCCGCG GCAGCAGCCG CACCGGCCCC GGTCGCCAGG
CCGCAGGTTG CACCGCCACC TCCGCCGCCT CCGGCGCCCA AGGTGGAAGC ACCGCGTCCG
GCACCGCCGC CACCACCGGC TCCGCCGAAA ATTGAAGCTC CGCGCCCAAC ACCGCCGCCT
CCGCCGGCAC CGAAGATTGA AGCTCCGAAG CTGGCCCCGC CGGCGCCTGC TCCGATGCCA
GTTGCCGCCG CTCCAGCGCC TGCAGTCGAG CGCGCTCCTG AGCCGCCGAA GCCACCGCCG
CAGCCACCGA AGCGGCAGGA ACAGAAACAG CAGGGCAAAT GGAAACCGGT AGCGCCTCCG
AAGCAGGAGG AAGAGGCTCC GGTGATCGAG AAGCCCGCGC CGAAGCCGGA ACCCAAGGCG
CAACCGAAGC CGGAACCGAA ACCTGAGCCC AAACCGCAGC CGAAGGCCGA GCCGGTCATC
GCTGCCCCCT CGTTCAGCTA CGAAGCGAAA ACCGAGGAAG GCGAAGGCGG CGGAAACAAG
GGCATGATTT TCGGCGGCGT CGCAGCCGCA GTGCTGGTAA TCGCGATCGG CGGATACTTC
ATGATGGGCA AGAAGTCGAG CCCAGCGCCT GCTCCGCCCA CTACTACGAC GCAACCGGCG
CCTGAGAACA CCGCGAACAC AACGCCCGCC TCCAACGTAA CTGGAACGGT GACGACTGGA
GCAAACCCCG CGGCCGCAAA CAACACCAAG CCGCAGGACC AGGGCAAGAA CAACAACAAC
ACGACCGCCA GCAAGCCGGA AGAGCAGCAG CAGGCGAAGC CGGCAGCCGC TCCGCTGGTT
GTAGGCTCCG CACCTTCGGC GAGCAACAAG CCGCAGCAGG TTGCAGATGT CTCCGCGCCC
TCGCTGAACC TGGCAGGCGC AGCCGGTGCG GGTCCGAATC TTGACGTTCC GGTAACCAGC
TCAGCGCCGA AGCTTTCCGC TCCTGCGCCG GCCAATGCCG TAATCGTTCC AAGCCGCCTG
GTCCAGCGCG TGAACCCGAA CTATCCGCAG TCCGCCAAGC AGTACCGCAT TGAAGGCGCG
GTAACGCTGA GCGCGACCAT CGGATCTGAC GGACACGTGA AGGACGCGAA AGTACTGAAC
GGGCCGCCGA TGTTGCGCGA CTCCGCACTC AACGCAGTTC GCCAATGGAA ATATGCTCCT
TCCACGGTGA ACGGGCGTCC AGTCGAATCG AGCGTACAGA TCGTGCTCCA GTTCAAGATG
CCTAGCTAA
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| Protein sequence | MPDSVTKDSE FEIQYPPSIL EDVTKLVQRV QTFTGAAGAA IALREGEDMV CRGSRGNNAP
DVGMVLSTDG TFTGLAVTGM KAVRCDDTEN DSRVDPEISR ALRIKSMAVV PVLSGMRVSG
VIATFSSAAS AFSDTHMAVL KTMADGLGAS IQRFLEVQGI STGAPMVSAA AAAAPAPVAR
PQVAPPPPPP PAPKVEAPRP APPPPPAPPK IEAPRPTPPP PPAPKIEAPK LAPPAPAPMP
VAAAPAPAVE RAPEPPKPPP QPPKRQEQKQ QGKWKPVAPP KQEEEAPVIE KPAPKPEPKA
QPKPEPKPEP KPQPKAEPVI AAPSFSYEAK TEEGEGGGNK GMIFGGVAAA VLVIAIGGYF
MMGKKSSPAP APPTTTTQPA PENTANTTPA SNVTGTVTTG ANPAAANNTK PQDQGKNNNN
TTASKPEEQQ QAKPAAAPLV VGSAPSASNK PQQVADVSAP SLNLAGAAGA GPNLDVPVTS
SAPKLSAPAP ANAVIVPSRL VQRVNPNYPQ SAKQYRIEGA VTLSATIGSD GHVKDAKVLN
GPPMLRDSAL NAVRQWKYAP STVNGRPVES SVQIVLQFKM PS
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