| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1477 |
|---|
| Symbol | |
|---|
| ID | 4071647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 1787402 |
|---|
| End bp | 1788310 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637983486 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_590553 |
|---|
| Protein GI | 94968505 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTCG ATCAGCTCCT GACTTTTCTC GAGGTAGCCA AGCTCGGGAA CTTCTCGCGC
GCCGGAGAAA AGGTCTACCG CTCGCAATCG GCCGTCAGCG CCCAAATCCG ACAACTGGAA
CAGGAATACG GCGAGCGTCT CTTTGACCGC TCGGGTAAGA TCGTGCGTCT TTCACCCGCC
GGAGAGGTAC TGCTGGAATA CGCGCAGCGC ATGGTTGCTT TGCGCAACGA GTCGTTGCGC
GCGGTTGCCG ATCAGGGCGA AACGCCTCGG GGAGTGCTGT CCATAGGCGC GAATGAGGCG
ACCTGCCTGT ATGTGCTGCC GGATATTTTC ACCGAGTATT GCCAGCAATT CCCACAGGTG
CAGATTACGG TTTACCGCAA CTTCAGCCGC AAGATTTTGC AAGCTGTGGA AGACGGCGTA
ATCGATCTCG GCATCGCGAC GCTTCCGGTG AAATCACCGT CGTTGAAAGT CCATCCCATC
TTCCGTGATC GCCTCGAACT GATGGTGCCA GTACGGCATC CGCTGGCCGC GAAGGAGAGC
GTGACGATCG AGGAGATCGC GGAGTATCCG CAGATTTTCC CGAAGACTGG CTACACGCGC
CAACAGCTCG ATAAACTGTT CCGCCCATAC AATTCGAAGC TGCGGGTGGC GATGGAGATC
CCAAGCGTTG GGCTGATCAA GAGCTTCGTG GTGTCGGGCG TGGGCGTAAC GCTATTGAGT
AGCACCTTCG CGCAAGATGA AGTGCGCGCA GGGAAAGCCA AGATGCTGCC GATTGCAGGG
GTGGACATGT GGCGCGAGTT AGGCCTGATC TACCGTAACG ATCGCACTCT ACCCCGTTCT
GCGACTGCAT TCATCGATCT CATGCGCCAT CGTCCGGTGG CGAAAAAATC GAAGTCGCAT
CGCATGTGA
|
|---|
| Protein sequence | MDFDQLLTFL EVAKLGNFSR AGEKVYRSQS AVSAQIRQLE QEYGERLFDR SGKIVRLSPA
GEVLLEYAQR MVALRNESLR AVADQGETPR GVLSIGANEA TCLYVLPDIF TEYCQQFPQV
QITVYRNFSR KILQAVEDGV IDLGIATLPV KSPSLKVHPI FRDRLELMVP VRHPLAAKES
VTIEEIAEYP QIFPKTGYTR QQLDKLFRPY NSKLRVAMEI PSVGLIKSFV VSGVGVTLLS
STFAQDEVRA GKAKMLPIAG VDMWRELGLI YRNDRTLPRS ATAFIDLMRH RPVAKKSKSH
RM
|
|---|
| |