Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1467 |
Symbol | |
ID | 4069617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 1773461 |
End bp | 1776556 |
Gene Length | 3096 bp |
Protein Length | 1031 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637983476 |
Product | ribonuclease |
Protein accession | YP_590543 |
Protein GI | 94968495 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00760754 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.972482 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGG AACTGTACGT CTCTTCCAAT CCACACGAAA CCCGTGTGGC GCTCGTGGAA GATGATCAGC TCGCGGAGAT TTTCTACGAA CGCGAGAACG AATACACCTT AGCGGGATCC ATTTACAAAG GGCGCGTCAC GCGAGTTCTA CCCGGAATGC AATCGGCATT CGTGGACGTC GGGCTTGAGC GCGATGCATT TCTGTATGTC TCGGATTTTC TCGACCTTCA GGACGAAGAA GACGAGGATT TTGAAGTAGC CGTCAAAACC AACGGCACTG CCGACAACAC GCGCGAGGAG CGACCGGCGC GCCGCGACAA TCGTCGTGAA GAGCGTCACG GCCGCGAGGA ACGCCAAGCT CGTGAAGATC GCCCAAGCCG GGAAAATCGC CGCGAGCCGC GGCGCAATCG TGAGGAGCGC CAACCGCCTG GTGAGCCGCA GCAGCCGACC GCAATTTTCG AGGGTGGCTA CAGCGAAGCT GAAGAAGAAA CTGAGGAAGC CTCTGTCGAA ACCGCGGGAA CTGAGGAAGG GAACTCCACT GCGGAAGAGA ACGGCGATGG AGAGGGCACG AGCCGCTGGC GTGGACGCCG CCGCCGCCGT GGTGGACGCC GCGGACGCAA TGGTGAACGT TTTGAACGCA CGGAAACTCA GCAGCAGGCT GCGTCAGCCT CCGCGGCAGA GTCCGAGGTC GAAGAGGAAG AACAGCCTGA GGTGCACGAA GAAGCTGCAC CGGTCCCGGA AGCAGAAGTT GAAGAGCAGC CCCGTCGCGA GCGAGAAGAT CAGGGTCGTC GTGACCGCGC CGAGCGCGGC ACTCGCCGAG GACGCGACCG TGGCGGTCGT GACCGCGACC GCGGTGATCG TGAGAGTGGT GGTGGTGATT TTGGACCGCC TCCCGGATAT CAGCCGATCG TCATGCCAGG CGAATCGCTT TCGAAGTATC GCAACCGTCC TGCGGCAGCC GAAACTCATG TTGAGCACCC GGCGCACGAG CAAACGCTTG AGACGCACGA ACCTGTTCAG CATGAAGAGC ACGAGTCGAA CACACAGGAA GAAGCTGCGA GCATCGTGGC CGCCGCCTTT GAAGAGCACG CAGTACCCGC GGTAACGCAC GAAGAGGCCG TCTCTGAGCC GCACACGGAA GAAGTCTCCG AAGCGGCACA ACAGCACGAC GAAGAGCCCA CTGAAGGCTT TGCCGAATTG CGCGCCCCGC GGCAAGTCGC GGAAATGCGT GTGGATCCGG AAGCGGAAGC CTATCGGAAA GACGTCGAAG ACGAATTCGA GGAAGAAGAA CAGGTCGAAG AAGCCGAACG TGCCGAGCAG GAAAGCGCGG CAGAAGCTCT GAGTGCCCCT GCGGCAGAAG TCGCGCAAGA CGAAGAGGCA CTCAGCTCCG AACTCGAAGC CCAGCCCGTG GCTGAAGACG ACGACGTCAC TTACCATCGC GTCACCGAAT ACGAAGCGCC GCCCCGCATC CTTCCCGAAA CCGCACCTGT GGGTAAGACC CTCGAGCACG AAACCTTCGA TGGCGAAGAG TCCGGAGAAT CCGTGCAACT GGCCGAAGAC GACGCCGCCG AAGCCGACAT GGAACTCGAA GAAGAAACTC TCGAGGCCGG TGGCGAAAAC TCGGGTCGAT GGATTCCTCA GGTCGCCGAT ATCGAAGAGG ACTTTCACGA GCATCAGGCG GAAGACTTTG AGTACTCGAA CGGCAACGGC GAAGCCGTAG AAGCCGCTGA AGGCGAGTTC GAAGAGGAAG GCGAAGAAGA AGGCGATGGC GAAGAAGAAG AGGCTGTCGC CGGAGAAACT GGCAGCAAGC CTCGACGCCA GTTTGATCGT GGACGTCGCG GGCGTCGTGG ACGCCGCGGT GGACCGCCGA TGAAGAACAT GCAGTCGCGG AACACTCCGC TGATCTCCGA CCTCCTAAAA GAAGGTCAGG AAATTCTGGT CCAGATCGCG AAGGAACCGA TCGGTAAGAA GGGCGCGCGC ATCACGAGCC ACATTGCCCT GCCGGGACGT TTCCTCGTGT ACATGCCGAC CGTCAACCAC GTCGGCGTGT CGCGCAAGAT CGCGTCCGAC GAAGAGCGTC AGCGCCTGAA GCGCATCGTG AGTAGCGAGC GCGAGAACGG CCATGGCGGC TTCATCGTGC GCACTGCAGC AGCGAATGTG AAGGAAGACG AGCTCCGCGC TGACATCCGC TTCCTTAAGC ACCTGTGGAG CGAAATCAAA GGCCGCTCCG ACAAGAGCAA GTCGCCGGCG CTCATCTACC ACGATCTCAA CCTCGTGGAG CGCGTGCTGC GCGACCAGGT GACCAGCGAC TTCACCACCA TCTGGGTCGA TAACGAATCC GAATACGAAC GCGTACTGCG CTTCGCCAGT CGCTTCCAGC CGTCCCTGGT GCGGAGGATC AAGCTCTACA CCAAGAACAC GCCGCTCTTC GAGGAGTTCG GAATCCAGGA AGAGATCAAC AAGGCGTTGA AGGCGAAGGT GTGGTTGAAG AGCGGTGGCT ACATCGTGAT CAACCAGACG GAAGCCCTCG TCGCGATTGA TATCAACACC GGCAAATACG TCGGCAAGAC GACACGCCTC GAAGACACCA TCGTGAAGAC GAACGTGGAC GCGATCAAAG AGATCGTGCG CCAAATCCGC TTGCGCGATC TTGGCGGAAT CATTGTGATC GACTTCATCG ACATGGATGA GCGCAAGAAC CGCCAGAAGG TCATGGCTGC GCTCGAAGAA GCTCTGAAGT CCGATCGCGC GCCTTCAAAG GTGCTCCAGT TTAACGACTT CGGACTAGTG GCAATCACCC GTAAACGCGT CAAGCAATCG CTGGAACGCA CGCTGGGCAC GCCGTGTTCG TACTGCGAAG CGACTGGCTT CGTGAAGTCC GTGCCGACTA TGTGCAGCGA GATCTATACC GAAGTTCGGA AGCTCGCTAA GCATCTCGAT GGTAAGGACG TGACGATCCG CGTGAACCCG GAAGTCGCGA AAGCGATCAA GGAAAATAAC GGAAAGCTGG TCCAGGAATT CGAAGAACTC ACGGGCAAAA CCGTGATCGT GAAGAGCGAT CCCGCGATGC ACCAGGAACA CTTCGACATT CACTAA
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Protein sequence | MNKELYVSSN PHETRVALVE DDQLAEIFYE RENEYTLAGS IYKGRVTRVL PGMQSAFVDV GLERDAFLYV SDFLDLQDEE DEDFEVAVKT NGTADNTREE RPARRDNRRE ERHGREERQA REDRPSRENR REPRRNREER QPPGEPQQPT AIFEGGYSEA EEETEEASVE TAGTEEGNST AEENGDGEGT SRWRGRRRRR GGRRGRNGER FERTETQQQA ASASAAESEV EEEEQPEVHE EAAPVPEAEV EEQPRRERED QGRRDRAERG TRRGRDRGGR DRDRGDRESG GGDFGPPPGY QPIVMPGESL SKYRNRPAAA ETHVEHPAHE QTLETHEPVQ HEEHESNTQE EAASIVAAAF EEHAVPAVTH EEAVSEPHTE EVSEAAQQHD EEPTEGFAEL RAPRQVAEMR VDPEAEAYRK DVEDEFEEEE QVEEAERAEQ ESAAEALSAP AAEVAQDEEA LSSELEAQPV AEDDDVTYHR VTEYEAPPRI LPETAPVGKT LEHETFDGEE SGESVQLAED DAAEADMELE EETLEAGGEN SGRWIPQVAD IEEDFHEHQA EDFEYSNGNG EAVEAAEGEF EEEGEEEGDG EEEEAVAGET GSKPRRQFDR GRRGRRGRRG GPPMKNMQSR NTPLISDLLK EGQEILVQIA KEPIGKKGAR ITSHIALPGR FLVYMPTVNH VGVSRKIASD EERQRLKRIV SSERENGHGG FIVRTAAANV KEDELRADIR FLKHLWSEIK GRSDKSKSPA LIYHDLNLVE RVLRDQVTSD FTTIWVDNES EYERVLRFAS RFQPSLVRRI KLYTKNTPLF EEFGIQEEIN KALKAKVWLK SGGYIVINQT EALVAIDINT GKYVGKTTRL EDTIVKTNVD AIKEIVRQIR LRDLGGIIVI DFIDMDERKN RQKVMAALEE ALKSDRAPSK VLQFNDFGLV AITRKRVKQS LERTLGTPCS YCEATGFVKS VPTMCSEIYT EVRKLAKHLD GKDVTIRVNP EVAKAIKENN GKLVQEFEEL TGKTVIVKSD PAMHQEHFDI H
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