Gene Acid345_1414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1414 
Symbol 
ID4068755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1712282 
End bp1712821 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content59% 
IMG OID637983423 
ProductXRE family transcriptional regulator 
Protein accessionYP_590490 
Protein GI94968442 
COG category[K] Transcription 
COG ID[COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0298473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCA CGCTCGCACC TGTTGACTCC AGGGAAGTGG TTCGATGCGA TAAATGCACA 
CTCGTCCAGT TCCGTACTAC CAACAATCTC TGCCGAAAAT GCCGCCAATC GCTTGATCCG
GAAGAACCGG AACAGGTCAT AGCGCCGCCG CAACCCGCAG TCCACGTACC GTCCCACAGT
TCCCATTCGC AGTTGCAGAT TGCCCAATCC ATCCGCAACC TGCGTCAACG TGCCGGACTC
AGCCAGCGCC AACTCGCCCT GCGCATGCAG GTGCCGCGTA CGTACGTCTC GAAGATCGAG
AACGAAAAGG CCACGCCGAC ACTTTCATCG CTCGAGCGCC TTGCCAAAGC ACTGCAGGTG
ACCCTGCCCG ATCTATTGAC GGGCGGCCAG CCGAGCCGTG AAGAGCAGGT GCGCGACCTG
ATGAGCGATT CGTTCCTCGC CGAACTCATG CCGATTTGCC AGCAGTTGAA CGGCCTGCAA
CTCAACAGCA TTCTGAACCA GGTGCGCGAA ATCACCATGC GGCCCAGAAG GACCGCGTAG
 
Protein sequence
MATTLAPVDS REVVRCDKCT LVQFRTTNNL CRKCRQSLDP EEPEQVIAPP QPAVHVPSHS 
SHSQLQIAQS IRNLRQRAGL SQRQLALRMQ VPRTYVSKIE NEKATPTLSS LERLAKALQV
TLPDLLTGGQ PSREEQVRDL MSDSFLAELM PICQQLNGLQ LNSILNQVRE ITMRPRRTA