| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1274 |
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| Symbol | |
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| ID | 4073244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1548168 |
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| End bp | 1549868 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637983283 |
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| Product | regulator of RNA terminal phosphate cyclase |
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| Protein accession | YP_590350 |
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| Protein GI | 94968302 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4650] Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.48322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGTATCC GGAAGTTGCT GATTGAGTGT ACTTTATGCG TTCGCGGTGG GAATTTATCG
TGCTCACTAT TCGCTTATAT TCTAAGATTT ATACATATGA AGAACCGTGA GCGCCGTCCG
ACGGTCGTCG TGGGGCTGCT TGGAACCACG CTCGACCTTG GGAAACATCC AGACCGCTGG
CAGAACTGGC GACCATCGGT GGCAATTTGT CGGCAGCCGG ATCTCATTGT CGACCGCTTT
GAGTTATTGC ATGGGAGGCG CGAGCAATCG CTGGCCGAGT TGGTGCGAGC GGATATCGGG
ACGGCGTCGC CAGAGACTGA GGTTGTGCTG CACAACGTCG AGTTCAGCGA TCCGTGGGAC
TTCGAGCAGG TCTACGAGAA GCTGTTCTCG TTTGCGCGCG GCTACACGTT CGACGATGGA
GAGGACTACC TTGTGCACAT CACGACCGGC ACTCACGTCG CGCAGATTTG CCTGTTTCTG
CTGACGGAGT CGCGGCATAT TCCGGGCAAG TTGCTGCAGT CGTCACCGGA CCGCGAACGT
GGTGGCGCAG GTACGGTGAA GGTCATCGAC CTCGATCTGT CGAAGTACGA TCGCATCGCA
TCGCGATTTC GGCAGGAGCA GCAGGAGGGC GCGTCGTTCC TGAAGGGCGG GATTGAGACG
CGGAACGAGG GATTCAACCG GTTGATCGAG CGGATTGAGA AGGTGGCGAA TGCGACGCGT
GATCCGATCC TGCTCACTGG GCCGACCGGC GCGGGAAAGT CACGATTGGC GCGGAAGATC
TTCGAACTAA AGAAGCAGCG TCATGCGGTG GCGGCGAACT TTGTGGAGGT GAACTGCGCG
ACGCTGCGTG GCGATGGCGC GATGTCGGCG CTGTTTGGGC ACAGCAAAGG TGCGTTTACC
GGGGCGGTGA CCGAACGCCT GGGGTTGTTG CGCTCGGCAA ACGGCGGCGT GTTGTTCCTG
GATGAAATCG GAGAGCTGGG ACTCGATGAG CAGGCGATGC TGTTGCGCGC CATTGAAGAG
AAGGTGTTTC TGCCTCTCGG GTCCGACAGG GAAGTGAAGA GCGATTTCCA ATTGATTGCG
GGGACCAACC GCGACCTGTT GCAAGCGGTC CGGGACGGCA AGTTCCGCGA GGACCTGCTC
GCGCGTATTA ATCTTTGGAT GTTTCAACTG CCCGGTCTCG CCGACCGGGT GGAGGACATT
GAGCCGAACC TTGCGTTTGA ACTGGAGCAA TTCGCGGCGA GAAACGGCGA TCGAGTGGCG
TTCAACAAGG AGGCGTATCA GCACTTCCTG CAATTCGCGC GATCGTCGGA AGCGAAGTGG
TCGGGAAATT TCCGCGATCT GAATGCAGCC GTGGTGCGAA TGGCGACGCT ATCGGCGGGC
GGGCGGATTT CGATTGAGAT TGTGAGGGAA GAGATTCGGC GGCTTGCTGA CTCATGGTCT
CGCAGCGAGG GAGGGCATCC GAGCGATCTT TCTCTTGTCG TCGCCCCGGA AGTTCTCGTG
CAGATGGATT TGTTCGATCA GTTGCAGCTT GCCCAGGTCG TCGAAGTTTG TCGGGCCGCG
CGATCGCTGT CCGTCGCGGG GCGGCGTCTC TTTGGCGTTT CGAGGACCAG GAAGGCAACG
GGGAATGATG CTGATCGTCT CAGCAAATAC CTGGGACGGT TTGGATTGTC GTGGAACGAA
GTGCGCGCAG GGTCCCGCTA G
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| Protein sequence | MGIRKLLIEC TLCVRGGNLS CSLFAYILRF IHMKNRERRP TVVVGLLGTT LDLGKHPDRW
QNWRPSVAIC RQPDLIVDRF ELLHGRREQS LAELVRADIG TASPETEVVL HNVEFSDPWD
FEQVYEKLFS FARGYTFDDG EDYLVHITTG THVAQICLFL LTESRHIPGK LLQSSPDRER
GGAGTVKVID LDLSKYDRIA SRFRQEQQEG ASFLKGGIET RNEGFNRLIE RIEKVANATR
DPILLTGPTG AGKSRLARKI FELKKQRHAV AANFVEVNCA TLRGDGAMSA LFGHSKGAFT
GAVTERLGLL RSANGGVLFL DEIGELGLDE QAMLLRAIEE KVFLPLGSDR EVKSDFQLIA
GTNRDLLQAV RDGKFREDLL ARINLWMFQL PGLADRVEDI EPNLAFELEQ FAARNGDRVA
FNKEAYQHFL QFARSSEAKW SGNFRDLNAA VVRMATLSAG GRISIEIVRE EIRRLADSWS
RSEGGHPSDL SLVVAPEVLV QMDLFDQLQL AQVVEVCRAA RSLSVAGRRL FGVSRTRKAT
GNDADRLSKY LGRFGLSWNE VRAGSR
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