| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1227 |
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| Symbol | rplD |
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| ID | 4072618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1513055 |
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| End bp | 1513708 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637983236 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_590303 |
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| Protein GI | 94968255 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.150568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000101553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGCGACAA TTGACGTAGT AAACCTGAGT GGCGAGAAGG TCGGTTCGTT CGAACTGGCT
GACGAAGTCT TCGGTGCAGT GAACGAAGAC CTGCTCTGGG AAGCGGTGAA GCACTACCGC
GCCGGGCAGC ATCGCGGTAC CCACGCCACC AAGAACAAGA AGCTGGTCTC CGGCGCGGGC
AAGAAGCTCT GGAAGCAGAA GGGAACGGGC CGCGCGCGTG TGGGCTCGAT CCGTTCGCCA
CTGTGGCGTC ACGGCGGCAC CGTCCACGGA CCGCAGCCCC GTTCGTACGA CTACGCGTTC
CCGCGTAAGA AGCTCCTGGG TGCGCTGCGT TCGGCGCTCG CCGCCAAGCT GGCCGATGGC
AAGCTGACGG TGGTGGAAAG CTTCGACGTG AAAGAGCCGA AGGCGAATGC GTTCCGCAAG
ACGCTGGCGG GGCTCAAGGT GGACAAGACG GCACTGCTGA TCGAATCCGC TGAAAACAAG
AACCTCGAGT TGAGCTCGCG CAACCTTAAG GGTGTGGAGC TAGTAGCAGG CAATGCGGTT
CATCCGTATC ACCTGCTGCG TTACGACCGC GCGGTGATTG CGCGTCCGGC GCTCGAGAAG
CTGCAGAACT CGCTGAAAAA AGCGGCGAGC AAGCGTCATG CGGAGGTGGC GTAA
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| Protein sequence | MATIDVVNLS GEKVGSFELA DEVFGAVNED LLWEAVKHYR AGQHRGTHAT KNKKLVSGAG
KKLWKQKGTG RARVGSIRSP LWRHGGTVHG PQPRSYDYAF PRKKLLGALR SALAAKLADG
KLTVVESFDV KEPKANAFRK TLAGLKVDKT ALLIESAENK NLELSSRNLK GVELVAGNAV
HPYHLLRYDR AVIARPALEK LQNSLKKAAS KRHAEVA
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