| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1169 |
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| Symbol | |
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| ID | 4072910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 1453723 |
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| End bp | 1455582 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637983179 |
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| Product | lysine decarboxylase transcriptional regulator, CadC |
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| Protein accession | YP_590246 |
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| Protein GI | 94968198 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCAA TGGCTACAGT ATGGCCGTTG GGTATCTTTT TTGTATCGCC GCAAGCCGCT
GAATACACGA TAATTGCTGC CCAAACCATG AGCACTGCGA AGCGATCTGC GGCTGAATTC
GAACTCGACT TGGGGCGTTA TGAGCTACGA CGCTCGGGCA GTCGGGTGAA GCTCGAGAAA
AAGCCGATGG AACTGCTCAT GTTCCTAGTG AGCCGGCGCG AGCAGATGGT GACGCGGGAA
GAAATCATTC GCAAGATCTG GCGAACCGAC CTCTTTATCG ACGCCGAAAG AAATCTGAAC
AACATCGTGC GAAAAATCCG CACGGCCCTC GGAGACGATC CCGACCGTCC CCGCTTTTTG
GAAACTGTGG TTGGCGTTGG CTACCGCTTT ATTGGGCCCA TGCGCGTGGT GGAGGCACAG
TTCCCGCGCG CAGAGACGCT GGACATTCCG ATTGATGAGA CCTCACGTTC GATCGCCGTG
TTGCCTCTTG TCATGGCTGG GAAGGCGAAC GACGACGAAG GCGTGGGCAT TGGCTTCGCC
GATGCACTGG CTGCGCAGCT AGGGAAGTTG CAAGGCGTCG TGGTGTTGCC GAGTTCGGCG
ACGATACATT TCTCGGCCGC AGTATCGCCG AAGGAAGTTG CTGCCAAACT GGCGACGCGG
TTCGTTGTAC ACGGTGCGAT TCGTTTGCAG AAGGGGGAGT GGCGGCTCTC TGTCGAGATG
CTGGACGCGC ACTCCGGAAG GGTGTGTTTC TCGAAGAGCT TTGATACAAG TTTGGACCGC
TTCGCGCAGG TGGAAGGCGA GGTCGCCCGG GAAGTCGCGA GAGCGTTGAA GTTACCGCTC
AACGCGCCGC AGCAGCGTCC ACGGCATAGC CGCAATCCCT TGGCGTATGC GGAGTTCATG
CGTGGCTACA AGCTCAGTGG ATCCGGAGAC CCCGCGGAGG TGGCACGTGC CAGCCAGCAT
CTTGGGACTG CGGTGGCTCG CGACCCCAAT TTCGCACTCG CGCACGCCAC GCTATCTTTT
GTGTTTGCGG TGCAGCACTT CGAGTCAGAC CCGACCAGTG CGCTATTGGA GAAAGCTGAG
TTCCACGGTA GCCGCGCACT CGAACTCGAC CCCGAACTGC CCGAAGCGCT GGTGGCGCGT
GCGTTCCTGG TGTGGGGACC GTCCAAAAAT TTTCAGCACC TGGAGGCGAT CACAGATCTG
AAGCGGGCGC TGTCGCTACA AAAAAACTTG CCACACGCCT ACAACCGACT AGGAACGATT
CTCGCGCACG TTGGGTTACT TGATCACGCG CTGGAAATGT TTGAGCGCGG GAGGCCGTTC
CATCCAAAGC GGGCGGTCAG TCCAAGCGTG GTGCAAGTGT ACGGCTGGAA AGGCGAATTC
GAACGAGCAG CGGAAGTCAT CGCAGCGTGG CGCGAGGAGA GTCCCAACAA TAAGTACGCG
CTGCACTGGG CTCCGTTCCC CGCCATGATG ACCGGCGACT GGGACGCGGC GTCGCAATGC
ATGGAGGAAT CGCTCGCGGC AGCGCCGCAC GATCCGCTGA TGATCAGTAT GCAGGGGCTT
CTGCACGCCA GGATGGGGAA GGCCGAAGCA GCGATGGATT GCGTGATGAA GGCATGTTCT
TACCCTCAAT CATTTGGGCA CGCACATCAC AGCTACTACC AGATTGCCTG TATCCACGCG
CTGGTCGGTC GTCCGGAGAC GGCCTTTGCA TGGCTGGAGC GAACCGTGAA TACGGGTTTT
GCCTGCTGGC CGTTTTTCCT CAAAGATCCT TGTCTGGAGA ACCTGCGTGC GATGCCGGAG
TTTGGGCTGC TGGTGAGTTC ACTGCAGGCG AAATACCCGG ACCATTTGGG TCTGCTTTAA
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| Protein sequence | MIPMATVWPL GIFFVSPQAA EYTIIAAQTM STAKRSAAEF ELDLGRYELR RSGSRVKLEK
KPMELLMFLV SRREQMVTRE EIIRKIWRTD LFIDAERNLN NIVRKIRTAL GDDPDRPRFL
ETVVGVGYRF IGPMRVVEAQ FPRAETLDIP IDETSRSIAV LPLVMAGKAN DDEGVGIGFA
DALAAQLGKL QGVVVLPSSA TIHFSAAVSP KEVAAKLATR FVVHGAIRLQ KGEWRLSVEM
LDAHSGRVCF SKSFDTSLDR FAQVEGEVAR EVARALKLPL NAPQQRPRHS RNPLAYAEFM
RGYKLSGSGD PAEVARASQH LGTAVARDPN FALAHATLSF VFAVQHFESD PTSALLEKAE
FHGSRALELD PELPEALVAR AFLVWGPSKN FQHLEAITDL KRALSLQKNL PHAYNRLGTI
LAHVGLLDHA LEMFERGRPF HPKRAVSPSV VQVYGWKGEF ERAAEVIAAW REESPNNKYA
LHWAPFPAMM TGDWDAASQC MEESLAAAPH DPLMISMQGL LHARMGKAEA AMDCVMKACS
YPQSFGHAHH SYYQIACIHA LVGRPETAFA WLERTVNTGF ACWPFFLKDP CLENLRAMPE
FGLLVSSLQA KYPDHLGLL
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