Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1130 |
Symbol | |
ID | 4069900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1407127 |
End bp | 1407957 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637983139 |
Product | cyclic nucleotide-binding protein |
Protein accession | YP_590207 |
Protein GI | 94968159 |
COG category | [S] Function unknown [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [COG4420] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000651756 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000750922 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGGCTTGCA CACCGGAAAT TCTCAAAGAC GTCCCCTTGT TCACCCTTCT CGACCAGGAC GAACTCACCG TTCTCAGCAG CCAGGTCGAG CACCGCAAGT TCACAGCTCG CCAGCGCATT TACAAAATGG GCGAGCAGAG CGGACGCGCC TACGTCATCA TCAACGGCTC CGTGGTCGTG AGCACGGTAG ATTCAGATGG CCAGGAAGTC ACGGTGGACC AGCCCGGTGT CGGCGAGTTC TTCGGCTTCG CCTCCATGAT TGAGGGCATC CCGCACCAGA CGACCGCTAC GGCGATCACC GAGACCGAGT GCATCGAGAT CGACCGCAAC GACATCGAGA TGCTGCTCTC GAAAAAGCCC CACGCCGGCA TTGACCTGCT CACCCAGGTC GCGCGCCAGT TCCACACCAC GCAACAGCTC GTCCGCGTGC GCTCGCAGCG CGACCCCAAC GAAGTCATCG AAGAACACAC CTCGTTCGGC CAACGCATCG CTGACGGCGT CGCCCAGTTC GGCGGCTCGT GGTCATTCAT CATCACCTTC GGCATCATCC TCATCATCTA TTCCGGCATA AACGTCTGGC TCGCAAGCCG TGCCTGGGAT CCGTACCCGT TCATCCTGCT CAACCTCTTC CTCTCCATGC TCGCCGCCAT CCAGGCGCCG GTCATCATGA TGAGCCAGAA CCGTCAGGAC ATGAAGGACC GTCTCCGCAG CGAACTCGAC TTCGACGTAA ACAAGCGCGC CGCCAATGAT ATCCAGGGCC TCGCCCGCAA AATGAACCTG ATGGCCGAAA AGATCGACGA TCTAGAAGAA CTAGTCCGCG AAAAGAAGTA G
|
Protein sequence | MACTPEILKD VPLFTLLDQD ELTVLSSQVE HRKFTARQRI YKMGEQSGRA YVIINGSVVV STVDSDGQEV TVDQPGVGEF FGFASMIEGI PHQTTATAIT ETECIEIDRN DIEMLLSKKP HAGIDLLTQV ARQFHTTQQL VRVRSQRDPN EVIEEHTSFG QRIADGVAQF GGSWSFIITF GIILIIYSGI NVWLASRAWD PYPFILLNLF LSMLAAIQAP VIMMSQNRQD MKDRLRSELD FDVNKRAAND IQGLARKMNL MAEKIDDLEE LVREKK
|
| |