Gene Acid345_0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0990 
Symbol 
ID4068657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1255491 
End bp1255886 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content53% 
IMG OID637982997 
ProductPilT protein-like 
Protein accessionYP_590067 
Protein GI94968019 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00286661 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGTCG TGGATAGTAC GGTTTGGATT GACTATTTCA GGGCCGTCCC AAATCCCCAC 
ACAAATTGGC TTGACCGAGA GTCGGCTCGC CAGCCGCTCG CGATTACGGA CTTGATTCTC
TGCGAGGTAC TGCAGGTTAT ACGAGACGAT GTAATGTATC GACGAGTCCA GCGGGATCTT
TGCCGATTTA CCGTATTCGA TTCCGGCGGG GCGACCCTTG CGACAAAAGC GGCCGCGAAC
TACCGGTTGC TGCGATCGAA GGGTTTCACC ATACGATCCA CAATTGACTC TCTCATCGCA
ACGTTTTGCC TCTCAACCGG GTACAGCCTG ATCCATCGCG ATCGCGATTT TGATTGTTTC
GAGCGAGTAC TGGGGTTGCA GGTAGTGCAT CCGTAA
 
Protein sequence
MIVVDSTVWI DYFRAVPNPH TNWLDRESAR QPLAITDLIL CEVLQVIRDD VMYRRVQRDL 
CRFTVFDSGG ATLATKAAAN YRLLRSKGFT IRSTIDSLIA TFCLSTGYSL IHRDRDFDCF
ERVLGLQVVH P