Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0938 |
Symbol | |
ID | 4070820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 1194386 |
End bp | 1195846 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637982945 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_590015 |
Protein GI | 94967967 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0161289 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGACAA ACACCTCCAT CGCCGCCAAG CTCACGTGGA TGAACATCGC GGTCACCACG GTCGCGCTGC TCGTCGCTTC CGTCGGCTTC CTCTTCTATG ACCAGTCGAA CGCGCGCACT AGTCTTGTCA CCAGTTTGTC CACACAGGCA CAGATCATCG CCGCGAACAG TGTCTCGGCA CTCGAGTTCA ACGATCCCGA GTCGGCCCGC CAAACTCTCC GAGCGCTTGC CGCGTCGCCA AACGTCGAAG GTGCGGGCCT GCTCACGCCG GACGGCCAGC TGTTCGCCGA GTACTGGCGC AGTGCCGACG TTCGCGTGAA CGTGCTGCCA TCGTTATCAC CCGACAAGCA GCAAACCGTA CTGTTCTTCA GTGAGAAGGT TACGGTCATC CGCAACATTG ACTTCGGCGG ACGCCGCATT GGCGCCATCT ACATCCGCTC GAACCTCAGC TCGCTCAATG AGCGCCGCAA TCGCTTCCTG AAGATTCTCT TCTTCGTACT GCTCGCCTGC ATGGGCGCGG CTTTGATTGT CTCGTGGCTC TTCCGGCGCA CGGTTGCGGG GCCGATCGCG GAACTGGCCG ACACCGCGAT GAAGGTGTCG CGGGAGAAGA ATTACTCGCT ACGCGCGCAA CCAAGCTTGG CGCACGACGA ACTCTCCACG CTCATCACCG CTTTCAACGA GATGCTGTCG CAAATCCAGG TGCGCGATGC CGCGCTGCTC AGCGCGCGCA GCGAACTCGA ACTGCGCGTG CAGGACCGCA CCAAGCAGTT GGTCGCAGCG AACCGCGACC TCGAGGCGTT CTCCTACTCG GTTTCTCACG ATCTCCGCGG GCCGCTCGAA GTCGTGAATG GAATGAGCTA CATCATTCAC CTGCAATACG GCAACGAGCT CTCGCCGGGA TTGAAGGACT GCCTCGACCG CATCGATGAC GCCTCGAAGC GCATGAACGA ACTGATCGAA GACCTGCTCA ATCTCGCGCG CGTCACCAAG AGCGAGATGC ACCGCGAGCG CGTGGACGTC TCCGCGATGG CGCGGGAGAT CTTCGCCGAA CTCAAACAAC GCCATCCGCA GCGCGTGGTG GAAATCGTCG TTGCATCCGA TGCGATCGTG GTGGGCGACG CGCATTTACT TCGCGTGGCG ATGGATAATT TAATCGGCAA CGCGTGGAAA TATTCTTCCA ACAAATCACC GAGCAAAATC GAATTTGGCG TTCGACGTGC GAATGGCACC CCGGTGTACT TCATCAAGGA CAACGGTGCC GGCTTCGATC CGCGCGGGAT GCAGCGTCTC TTCCAACCAT TCCAGCGGTT GCATCCGCTA TCGGAGTTTC CTGGGACGGG CGTCGGTCTT GCCACCGTGC AACGCATTAT TCAAAAACAC GGTGGACGCA TCTGGGCCGA AGGTGCCGTG AACGAAGGCG CTACTTTTTC CTTCACCCTC GACAACGCTC CGGAATCCTA G
|
Protein sequence | MPTNTSIAAK LTWMNIAVTT VALLVASVGF LFYDQSNART SLVTSLSTQA QIIAANSVSA LEFNDPESAR QTLRALAASP NVEGAGLLTP DGQLFAEYWR SADVRVNVLP SLSPDKQQTV LFFSEKVTVI RNIDFGGRRI GAIYIRSNLS SLNERRNRFL KILFFVLLAC MGAALIVSWL FRRTVAGPIA ELADTAMKVS REKNYSLRAQ PSLAHDELST LITAFNEMLS QIQVRDAALL SARSELELRV QDRTKQLVAA NRDLEAFSYS VSHDLRGPLE VVNGMSYIIH LQYGNELSPG LKDCLDRIDD ASKRMNELIE DLLNLARVTK SEMHRERVDV SAMAREIFAE LKQRHPQRVV EIVVASDAIV VGDAHLLRVA MDNLIGNAWK YSSNKSPSKI EFGVRRANGT PVYFIKDNGA GFDPRGMQRL FQPFQRLHPL SEFPGTGVGL ATVQRIIQKH GGRIWAEGAV NEGATFSFTL DNAPES
|
| |