Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0919 |
Symbol | |
ID | 4070571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 1161273 |
End bp | 1163024 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637982926 |
Product | ASPIC/UnbV |
Protein accession | YP_589996 |
Protein GI | 94967948 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.480457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0168128 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCATTC GCGTTTTACG GCCTTTTCTA GCGTCGGCCA CATTCCTGAC GCTTTGCCTC GCACTCTCAC CCAGCAGCCC CGTAGAGGCC GCCCAGACGC AATCCACAGC CGCTCCCGCA GCGCCACTCA AGGTGAACTT CGTCGACATC GCCGAAAAGG CCGGTCTCAC TGTTGACAAT GTCTACGGCG GCGTCGATTC CAAGAAGTAC ATCATCGAAA CCACCGGCTC CGGCATCGCC GTAATCGATT ACGACAAAGA CGGCTGGCCC GACCTCTTTT TCGTGAATGG AACGACCCTG GACGGTGCGA AAGGTAAAGA CCTCAGCAAC CGCCTCTACC ACAACAACCA CGACGGCACC TTCACGGATG TCACCAAGAA GGCGAACCTC TGGCATGCAG GATGGGGCCA AGGCGCCTGC GTCGGCGACT ACGACAACGA CGGCAACGAC GACCTCTTCG TCACCTACTA CGGCAAGAAC ATCCTCTACC ACAACAACGG AAACGGAACA TTCACCGACG TTAGCGAGAA AGCTGGCGTC GCCGGCAGCG GCAAAATGTG GGGAACGGGC TGCGCCTTCG TCGATTACGA TCGCGACGGC AAACTCGACC TCTTCGTCGC CAATTACGTG GACTTCGATC TCTCTACCGC GCCAGCTCCC GGCGAGCGTC CCACGTGCAT CTGGAAGGGT GCACCGGTGA TGTGCGGACC GCGCGGCCTG CCCTGGACTA AGAACCTGCT GTACCACAAC AAGGGCGACG GCACCTTCGA AGACGTGACC GACAAGGCCC GCATCGATAA GACCAATGGC CATTACTCGT TCAGCGTCTC AGTCGTTGAT TACGACGACG ACGGCTGGCC CGACATCTTC GTCGCCTGCG ACAGCACCCC CGCCATCCTG TACCACAACA ACCACGACGG CACGTTTACC GACGTTGCTG TCACCCTCGG CGCAGCCTTC AACGAAGACG GCCGCGAGCA GGCCGGCATG GGTTCCACCG TCGCCGATTA TGACGGCGAT GGCCGTCTCG ACATCTTCAA AACCAACTTC TCCGACGACA CCTCGACCCT GCTCCACAAC GACGGTCCGC CCGGTTTCAC CGACGCCACC ACCGCTGCCG GTCTCGGCCT GCAAACCAAG TATCTCGGCT GGGGCACCAT GTTCTTCGAC ATCGATAACG ATGGCTGGCC CGATCTCATC CTGGCCAACG GCCACGTCTA TCCCGAGGTC GACAAGTTCA AACTCGGCAG CGACTACGCC GAACCGCGTC TCCTGTATCG CAACTACGGC GACGGCAAAT TCACCGATCT CTCCACGACC TCCGGCCCCG GCATATCCGC ACCGCATGCT TCTCGAGGAG TCGCGGTCGC CGATCTCTGG AATGATGGTC GTCAGTCCGT GATTATCAGC AATATGAACG AGCGTCCACT GTTGCTGGTA AACGAGGTGA AGTACAGCAA TCACTGGATC GCCTTTAAGG CAATCGGCAC GAAATCAAAC CGCAGCGGCA TCGGAGCGAA GATTCAAGTC ACCGCTGGCA AGCGCGTCTT CGTAAATGAA GTCCGCAGCG GCTCCAGTTA CAACTCCAGC AGCGATCTCC GTGTTCACTT CGGTTTGGGG ACCGCGACCA GCGTCGATAC CGTAGAAGTT CGATGGCCCA GCGGCGAGAC CGAGCGCTTC ACCGCGAAGG TTGATCAGGT CAACACATTG AAAGAAGGTT CGGGCGAGAA GGTCGCAGCG GCAAAGAAAT AG
|
Protein sequence | MRIRVLRPFL ASATFLTLCL ALSPSSPVEA AQTQSTAAPA APLKVNFVDI AEKAGLTVDN VYGGVDSKKY IIETTGSGIA VIDYDKDGWP DLFFVNGTTL DGAKGKDLSN RLYHNNHDGT FTDVTKKANL WHAGWGQGAC VGDYDNDGND DLFVTYYGKN ILYHNNGNGT FTDVSEKAGV AGSGKMWGTG CAFVDYDRDG KLDLFVANYV DFDLSTAPAP GERPTCIWKG APVMCGPRGL PWTKNLLYHN KGDGTFEDVT DKARIDKTNG HYSFSVSVVD YDDDGWPDIF VACDSTPAIL YHNNHDGTFT DVAVTLGAAF NEDGREQAGM GSTVADYDGD GRLDIFKTNF SDDTSTLLHN DGPPGFTDAT TAAGLGLQTK YLGWGTMFFD IDNDGWPDLI LANGHVYPEV DKFKLGSDYA EPRLLYRNYG DGKFTDLSTT SGPGISAPHA SRGVAVADLW NDGRQSVIIS NMNERPLLLV NEVKYSNHWI AFKAIGTKSN RSGIGAKIQV TAGKRVFVNE VRSGSSYNSS SDLRVHFGLG TATSVDTVEV RWPSGETERF TAKVDQVNTL KEGSGEKVAA AKK
|
| |