Gene Acid345_0893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0893 
Symbol 
ID4069143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1112965 
End bp1114134 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content55% 
IMG OID637982900 
Productglycosyl transferase, group 1 
Protein accessionYP_589970 
Protein GI94967922 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.021774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTCG TAATATCCGC ACTTTGGGGC GCGACTCAGC CCTCTGGCAT ATGCCGGACG 
GTCGATGGGC TTGTCCGTGG AATAAAGGAA ATTGCTTCGG ATGTCGAACT GGCGATCGTC
GTCGGCAAGT GGCAGCGCGG TTATTTCGAG GATTGCTTCG AAATCAATTC GTCAAATGTG
CGGCTCGTTG ACGTAGATAT TCGAAACAAC TCTGTCAGTC GCAACTTGTG GTACGTGTTC
GGACTGCCGC GGCTCGCGAG GAGAGTCTCC GCCGACATCG TACACATGGC GTTCCCGGCT
CCAGTGATTC GCTCGGCTTT TCATTGTCCA ATCGTTACCA CCCTGCACGA TCTTTACCCG
TACGACAGTC CGAGCAATTT TGGTTACCCG CACGTGTTTG CGAATCGAAT GGCGTTGAGA
CGAGCGATCA GCGCCGCCGA TCGCGTCATT TGCGTTAGCG ACTTTACACT GTCGAGATTT
CGTGAGCGAT TTCCGGTGCC AGCTGCACAC AAGGGCGTCC ATATTGCCAA CGCTATTGTG
GCGAGCACTT CAGCGGAAGC GGGACAGTCG CAGATCGATG GTCCTCTGTT CCTTGCTGTG
GCACAGCATC GAGCTAACAA GAATCTAAAT TTATTGCTTC GCGCGTTCAA CTTTTATCGA
TCGCTCACCG ATGCCAAGGC GGGTCTGAAA CTGGTAATCG TGGGGATGGA TGGCCCTGAA
ACCACGCGCT TACATCACCT TGTTGATCGA CTCAGTTTAC ATGAGACCGT TGTGTTCCTC
GCAGGTCTCA CGGAGGGCGA ACTGGCGGCC CTCTATAGGG ATTGCGAGTT GTTTGTCACA
CTCTCCAGCG TTGAAGGATT TGGATTACCA CTAAGAGAAG CGATCGAGTC TGGATCGCGA
GTTGTTGCTT CCGACATCCC GGCGCACGGG GATGTTGAGC GTGGCCGCTG TGAATTCGTT
GCTCTCGGTG GGGACGACGA GGTTTCGCGA GTTGTTGCGG CGTTTCAACA GGCCTTGAGC
TCTCCGAGAA GGTTTTCGAC TAGTTCCCGT CAACAATCGC CTTCCCGAAC CGCAAGCAAG
TATCTCGATC TCTATAGCGC AGCGGTACGC GGGCAGGCAA CGAAGGGAAA GCATCCGTCC
AACGAGTTAT CGACCTTGGA GCATCGATGA
 
Protein sequence
MRVVISALWG ATQPSGICRT VDGLVRGIKE IASDVELAIV VGKWQRGYFE DCFEINSSNV 
RLVDVDIRNN SVSRNLWYVF GLPRLARRVS ADIVHMAFPA PVIRSAFHCP IVTTLHDLYP
YDSPSNFGYP HVFANRMALR RAISAADRVI CVSDFTLSRF RERFPVPAAH KGVHIANAIV
ASTSAEAGQS QIDGPLFLAV AQHRANKNLN LLLRAFNFYR SLTDAKAGLK LVIVGMDGPE
TTRLHHLVDR LSLHETVVFL AGLTEGELAA LYRDCELFVT LSSVEGFGLP LREAIESGSR
VVASDIPAHG DVERGRCEFV ALGGDDEVSR VVAAFQQALS SPRRFSTSSR QQSPSRTASK
YLDLYSAAVR GQATKGKHPS NELSTLEHR