Gene Acid345_0887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0887 
Symbol 
ID4069137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1104947 
End bp1105495 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content53% 
IMG OID637982894 
Producttranscription antitermination protein nusG 
Protein accessionYP_589964 
Protein GI94967916 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.769632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAGT CGAAATGTAA TGGGTACGAC GAACTTCACT GGTTCGCCGT CCAAACCCGA 
CATAGGCATG AAAAGCGGGT TGCGGAACGA TTGCGCCAAT CAGAGATTGA GACGTTCCTC
CCAATTCATC GTGCAGTACA TCGATGGAAG AACGGAATCA ACGCCGAAGT CAACCTGCCG
CTCTTTCCGG GATACTTGTT TACAAGACTC CGCGGATCCC AACGAATTCC TTTATTGCGC
GAGCCCGGAG TAATCGCGAT TGCGGCTTCG AGTAATTCGC CAACGCCTAT CGGCGACAAC
GAAATTGCAC AGCTTCGTCT CGTCGCAGAG AGCGTCAAAG CCGAACCGCA CCCGTTCCTG
GCGATCGGCC AGCAGGTGAA GGTGGTTGCC GGCCCGCTCT TCGGCATGGA GGGGATTCTG
ATTAGAAAGA AGAGTGAATA TCGGGTAGTT GTGTCAGTCA AGATCATCAT GCGGTCTGTC
GCGGTGGACG TTAGTGAGTT GGAAATCGAG CCGGTTCGCA CAAGTCACTT GAGATGGGAA
GAAGCATGA
 
Protein sequence
MLESKCNGYD ELHWFAVQTR HRHEKRVAER LRQSEIETFL PIHRAVHRWK NGINAEVNLP 
LFPGYLFTRL RGSQRIPLLR EPGVIAIAAS SNSPTPIGDN EIAQLRLVAE SVKAEPHPFL
AIGQQVKVVA GPLFGMEGIL IRKKSEYRVV VSVKIIMRSV AVDVSELEIE PVRTSHLRWE
EA