| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0808 |
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| Symbol | |
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| ID | 4068687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1000440 |
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| End bp | 1001900 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637982815 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_589887 |
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| Protein GI | 94967839 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.224492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.93988 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGTT TGATGACCAA GCTTATGTGC TATGCCGTGC TCGCGGCACC GTGCGCGTTT
GCTACCGGAT CAGGCCAGGA GGCCACTCCG GAGAAAGACA TTCCACTCAC CACTAGTTCG
GACGTAGCGC GGCGCGCGTT CCAGGGCGGA CTCGAGAATA TCGAGAACCA GCAGTCCAAG
CGTGCCCATG TCGACTTCCG GTCCGCAGTG CGCGCTGACA GCAACTTTGC GCTGGCGCAC
TTGTTCCTGG CATACGACAA CGGAAATCCG GCGGAAGAGA AGGCGGAGCT TCAGAAGGCG
CGCACGCTGG CCGCGAACGC CTCGAAGCCC GAACAGATGC TGGTGGAATG GATGGCGGGA
TCGCGTGAGG GGAAGATGGT TCCGGCGATC TCTGCACTGA ACGATGTGAC GTCCGCGTAT
CCCGAAGACA AGTTCCTGCT ATTTCTTGCC GGTCGCTGGA TGGTGCAACA GCAGAATTAC
GAAGGTGCGC AGCGGTTCCT CGAGCGGGCA GTGACGATCG ATCCGAATTA TCCGGCGGCC
CTGAACGAAC TGGCGTATGC CTACGCCGGC AACAGGATCT TCGACAAGGC ATTCGAGGCA
CTCGACAAGT ACGCGAAGCT GCTTCCAGGT GAACCGAATA CGCAGGACTC CTACGGGGAG
ATCAGCCTGA AGGCGGGGCG ATTCGAGCAG GCGGTTGAAC ACTACAAGAA AGCGCTGGAA
TACGATTCGA CGTTCGTGTG GTCGCAGGTT GGCCTGGGCG ACAGTTACAT GCTGATGGGG
AAAGAGCAGC AGGCCCGTGC AGAATATGCG AAGGCGGCTG CGATGGCACC GTCGGATGGC
GATCGGCTTA CGTGGCAACT GCAGTCGGCA TTGACCTATA TGTTCGCGCA TCAGCATGAA
TCCGCCGATG ATGCGTTCAC GAAGGTGGCT GAAGAAGCGA GTTCGTTGCA TATCGGCAAG
CAGGAAGCCA TGGCGCACAG GCTTATGTCG GCTTACGACC CGGATTTGCC GGGGTTCCTG
CGGCACACTG CTGACGCTGA AAGCGCGTTG AAGACACGCT CGGATATATC GAAGAGCGAT
CGCGACCAGG AGATGGCGCT GCTGTTAAAA TCCCGCGCTG TGCGGGCGGC GGAATTCGGC
CGCACGGACA TGGCGAACGA GTCCTTGAAG AAGCTCAGCC AGATGGCGGA GAGCATCCCG
GACAACGTAA TTCAACAGGC GAACGAAGGC GCGCAGGGCG GCGTATTGTG GGTCCAGAAG
AAATACGCCG AGGCCATACC TCATTTGGAA GAGGACCAGG GGAATCCGTT GAGTGCGGCG
CGCCTGTTGC AGGCGTATCG CGAGAGCGGA GACTCGTATC GTGCCGACTC TCGGGCGATA
CGGTTAAATA GTTATTACGA GCCGACGCTC GACGATTACC TGGCCAGGCA GCTGTTGAAC
GGCAAACAGC GCAAGAAGTA A
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| Protein sequence | MNRLMTKLMC YAVLAAPCAF ATGSGQEATP EKDIPLTTSS DVARRAFQGG LENIENQQSK
RAHVDFRSAV RADSNFALAH LFLAYDNGNP AEEKAELQKA RTLAANASKP EQMLVEWMAG
SREGKMVPAI SALNDVTSAY PEDKFLLFLA GRWMVQQQNY EGAQRFLERA VTIDPNYPAA
LNELAYAYAG NRIFDKAFEA LDKYAKLLPG EPNTQDSYGE ISLKAGRFEQ AVEHYKKALE
YDSTFVWSQV GLGDSYMLMG KEQQARAEYA KAAAMAPSDG DRLTWQLQSA LTYMFAHQHE
SADDAFTKVA EEASSLHIGK QEAMAHRLMS AYDPDLPGFL RHTADAESAL KTRSDISKSD
RDQEMALLLK SRAVRAAEFG RTDMANESLK KLSQMAESIP DNVIQQANEG AQGGVLWVQK
KYAEAIPHLE EDQGNPLSAA RLLQAYRESG DSYRADSRAI RLNSYYEPTL DDYLARQLLN
GKQRKK
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