Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0742 |
Symbol | |
ID | 4069084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 914127 |
End bp | 915194 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637982748 |
Product | NHL repeat-containing protein |
Protein accession | YP_589821 |
Protein GI | 94967773 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.150031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGACGTAC GAGGAGCAAG GGCCGCAGTA CTTACCTTGT CGATCCTCGT TCCTTTGACG TGCCTTGCCG CAACGAAAGA GAAGCCCGCA GAAGTTTCGG TTCCGGCGAT CGAGATTGAG GGTGGACGAC GCCTCACCTT CGAGCGGATG TTTACGACCG ATCGTGACGT CCTCGGCAAG AAAGGCTTCT GGACGAAGGT GGTGGACTTC GTCGCCGGTG AACCAGACGA ACATTTCCTA GTCAGACCCT ACAGTATCGC GGTGGATTCG CGCGGGCGAG CGATTGTCAC CGATCCGGGC GCGAATGGCG TGCACATCTT CGACCTCGCC CAGCATAAGT ACAAGTTCGT CGAACGCAAT GAGAAGGGCA AAGAGTCGAT GCTCCAGCCG CAATGCGTGG CGGTGGATGC GCACGACAAC TTCTACGTCA CGGACTCTGA GACCGGCAAG GTCTTCGTCT TTAATGCTGA CGGCAAGTAT CAGCGCTCGA TTGGCGCCTT GAAGGGTGGC GAAGGATTCT TCAAGCGGCC TACCGGGATT GCGATTGATT CGGCGGCACA GCGCGTGTAC ATCACCGACA CCCTACGCGA CAAGATTTAT GTCACCGACA TGCAGGGCCA AGTACTTGCC ACGATCGGCA AGCCGGGATC GGAACCTGGC GAATTGCACT ATCCGACCGA ACTGCGCATT GTGGGCGACG AGCTGGTGGT GGTGGATGCG ATGAACTTCC GCATCCAGAT CTTCGGAAAA GATGGCAGCT ATCGCGGCAG CATTGGCGAG ATCGGCGATA CGCCGGGCGC GATGTTTCGT CCCAAGGGCG TGAGCGTGGA TTCCGAGAAC CACATCTACG TGGTGGAAGG TGCGAGTGCG CGGGTACAGA TTTACGACCG CGAAGGCCAC TGGCTGTACT GGTTTGGCGG AAAAGGCACG GGGCCTGAGG AGTTTCAGCT TCCTTCCGGC ATTTTTATTG ACCACGAGGA CCGCATCTTC GTGGTTGACT CGTTTAATCG CCGGATCCAA GTGCTGCATT ATTACGGCGT CGGTAAGCGT GCAGGAGGCC AGCCATGA
|
Protein sequence | MDVRGARAAV LTLSILVPLT CLAATKEKPA EVSVPAIEIE GGRRLTFERM FTTDRDVLGK KGFWTKVVDF VAGEPDEHFL VRPYSIAVDS RGRAIVTDPG ANGVHIFDLA QHKYKFVERN EKGKESMLQP QCVAVDAHDN FYVTDSETGK VFVFNADGKY QRSIGALKGG EGFFKRPTGI AIDSAAQRVY ITDTLRDKIY VTDMQGQVLA TIGKPGSEPG ELHYPTELRI VGDELVVVDA MNFRIQIFGK DGSYRGSIGE IGDTPGAMFR PKGVSVDSEN HIYVVEGASA RVQIYDREGH WLYWFGGKGT GPEEFQLPSG IFIDHEDRIF VVDSFNRRIQ VLHYYGVGKR AGGQP
|
| |