Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0711 |
Symbol | |
ID | 4069783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 874808 |
End bp | 875416 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637982717 |
Product | signal transduction histidine kinase, nitrogen specific, NtrB |
Protein accession | YP_589790 |
Protein GI | 94967742 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACC TCTCAATCCA CGAATCGCTG TCGGAGCTGT ATAAAAGTGC TGACCTCGGC CTGGTGATGG CCGACATGGA GCGCGTTTTC GACGCCAACG AGGCGGCTCT CCAGATGTTC GGGTTCACGC GCGCGGAGAT GCACGAAGGC AAGCTGAACT GGCTCGAACT CACGCCGCCG GAGTACCGGC AACTGGACGA GAATGCGCTG GCACAATTGA GGGAGTTCGG CACCTGTGTT CCGTTCGAGA AAGAGTTCGT CCTCCGCGAT GGCACACGGT TCCCCTTCAT CATCGGCGGA GTGAGGCTCA CCCAACAACC ACTCAGTTGG GCCGCCTATC TGCTAAGCCT GCGCGAGAAC CGCCGCATCG CGTCAGTAGA GCAGAGTGCC CGCGATCTCA AGGCGAAGAC CAGGTTGATC AACCACCTGG CGCACGAGTT GAACAATCCC CTCGCTGGGC TGACGTTCGT GATCCACTTG CTTGGCACTC GCCAGGATGT GGCAACGGAC GATACGAAGA AGCTGCTCGG CACCGCCTCG CAGTTGGTGG AGCGCATTTC GGCAACGGTG CAGCATGTCT TGGTCGCCAC TGGAAACGAC GGCGTCTAG
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Protein sequence | MENLSIHESL SELYKSADLG LVMADMERVF DANEAALQMF GFTRAEMHEG KLNWLELTPP EYRQLDENAL AQLREFGTCV PFEKEFVLRD GTRFPFIIGG VRLTQQPLSW AAYLLSLREN RRIASVEQSA RDLKAKTRLI NHLAHELNNP LAGLTFVIHL LGTRQDVATD DTKKLLGTAS QLVERISATV QHVLVATGND GV
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