Gene Acid345_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0520 
Symbol 
ID4069940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp642001 
End bp644256 
Gene Length2256 bp 
Protein Length751 aa 
Translation table11 
GC content58% 
IMG OID637982525 
Productperiplasmic sensor hybrid histidine kinase 
Protein accessionYP_589599 
Protein GI94967551 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCCA GCTCTCCTGT TGAGGAATCA CAGGCACAAT CAGCGTCTCG CGAGGAGATA 
CGCAAGTTCT CTGGCGCATC GTTGCGCGCC AAATTCATGC TCGCCATGGT GCTCGTCACC
AGCGGTCTCA CCATTGGTGC GTTGGTAATC GTCCGCGCCC GAGTGACGCA ACATATCCAG
GAACAAGTCC AGCGCGACCT GAAGAACTCC TCCGAGTACC TTCGAAGTTA CGAGGGACGC
CGTGCCGAGC TCGTTGACCG CATGGCCAAG CTCGTCGCCG ATACACCCTT GCTCAAGGCG
CTCCTTACCA CTCGCGACGC CGCAACGATC CAAGACGGCA CGAAGAGTAT TGCCGCCGTT
TCTGGTGCAC AGCTTTTTGT TGCGACTGAT CCGGGGGGAA AAATTCTCGC CTCCCACGGA
ACCCAGGCAT CAGACCGCGC GCAGATCGAG AAATCGATCC AGGCAAGCAT GCAAGCCGGT
CGGCAACGCG ATTGGTGGTT GGTCAACGGA CATCTTTACG ATGTTGTTCT GACTCCTGTC
TCCGCCGGAG CAGGCGCTGA GACGCTCGAC GTCGGCATGC TCGCCTGTGG ATTTGAAATC
GATCCGAACC TCGTTCGGGA AATCGCTAGC CTTACCGATG CCGACGTGGT CGTCCGCTAC
AAGGATTCAA TTATCCTGAG CACTCTGCCC ACGGGTGCGG ATACCAGCGA AGTTCGAAAG
GTTCAGGCGG CTGGAGTTCA CGACATCCGA GTCGGCGATG AGCGATTCTT GCTGACGGAA
GTCATCCTCG GTCAGGAAGC GTCGAGTCCG ATTCTCGTGC TGCTCAAGTC TTATGACCGC
GCGACGGCAT TCCTCACCGT GCTGAATTGG ATCGTCATCT CCATCGGTCT GATCGCGGTG
CTCGCTGGTT TGGGACTGGC CTATGTCATT TCCAACCGAT TCACCATGCC GCTCCGCGAG
CTTCTTACCG GCGTTCAGGC GCTGCAAGAC GGAATGTACG ACTACCCGCT GGAAGCGCGG
GGAAATGACG AAGCCGCGCA ACTCACGGAT GCCTTCGCGC GTATGCGGAC AGCGCTCCAG
ACATCCCAGG AGCAACTCCT GCGTTCCGCT CGTATGGAAG CCCTTGGGCG TCTCGCCGGC
GGCGTCGCGC ACGACTTCAA TAACCTCATC ACCATCATTA GCGGTTATGG CGAACTCGCG
CTCGACAAGT CGAGCGGCGA TCCGCAATTG ACTTCTTTCA TTCAGGAAAT CCGCAAGGCG
GGCGAACGGG CTACGGGATT GACCCGTCAA CTTCTCGCCT TCAGCCGCAA ACAGGTGTTG
CAGGCCCAGC CCCTGGACCT CAATGCCATT CTCAGCAATA TCAATAAAAT GCTGCGCGTG
CTCGTCGGTG AAGATGTGCA ATTGGTGATC GTGCAGGGCG CTGGAATGCC AACCGTGATG
GCCGATCCCG GGCAGATCGA GCAGGTCATT ATGAACCTGA CGGCAAATGC TCGCGATGCC
ATGCCCGGCG GCGGAACACT GGGGATGACC ACAAGCGTCC AGTCTGGCGA CGCCCTTACC
GTTCCCTCTG GCGAAAAAGC AGCTGAGCGT TACGTTGTCC TTGCCATTAG CGATACGGGC
ACGGGCATGA CTCAGGACAC GATCAAGCAC ATCTTCGAAC CATTCTTTAC GACCAAGGCT
CCGGGTAAGG GAACTGGCCT CGGACTGGCC ACGGTATACG GCATCGTGCA GCAGAGTGGC
GGATTTTTGG AAGTGCAGAG CGAACTCGGC AAAGGCACAA CTTTCCGCGT CTGTCTGCCA
GCAGTCGAAA CCAAACCCAA GACCGTTGCC GACGTCGTCG TGGCCGCTCC GAAACAACGC
GCGTCGGGCG TGATCCTGGT TGTCGAAGAT GAGGAACCGG TTCGCCGGTT GGCGATTGCC
GGTTTACAAG AGCGCGGCTA TACCGTTCTT GCAGCCGCGA ATGGCCGCGA AGCGCTCGCC
GTAATCGCAG CGCAAAATCG GCCCGTAGAC CTGATCGTCA CCGATGTCAT TATGCCGGAA
ATGGGCGGTC GTGAATTGTT CGACGTGCTC AAGCGCGACT ATCCCGGCGT TAAAGTTCTC
TTCATGTCGG GATACACGGA TCGCTCGCTC GCGGAGCTAG GCGCGGAGTT GGAAGCCTCT
TTGATGCCAA AGCCATTTAC GCCGACAGCG CTCGCGCAAA AAGTTGGTGA CATCCTCGAG
CCGAACAAGG CTCGAACCGA AGTCAAGATC TCTTAA
 
Protein sequence
MPSSSPVEES QAQSASREEI RKFSGASLRA KFMLAMVLVT SGLTIGALVI VRARVTQHIQ 
EQVQRDLKNS SEYLRSYEGR RAELVDRMAK LVADTPLLKA LLTTRDAATI QDGTKSIAAV
SGAQLFVATD PGGKILASHG TQASDRAQIE KSIQASMQAG RQRDWWLVNG HLYDVVLTPV
SAGAGAETLD VGMLACGFEI DPNLVREIAS LTDADVVVRY KDSIILSTLP TGADTSEVRK
VQAAGVHDIR VGDERFLLTE VILGQEASSP ILVLLKSYDR ATAFLTVLNW IVISIGLIAV
LAGLGLAYVI SNRFTMPLRE LLTGVQALQD GMYDYPLEAR GNDEAAQLTD AFARMRTALQ
TSQEQLLRSA RMEALGRLAG GVAHDFNNLI TIISGYGELA LDKSSGDPQL TSFIQEIRKA
GERATGLTRQ LLAFSRKQVL QAQPLDLNAI LSNINKMLRV LVGEDVQLVI VQGAGMPTVM
ADPGQIEQVI MNLTANARDA MPGGGTLGMT TSVQSGDALT VPSGEKAAER YVVLAISDTG
TGMTQDTIKH IFEPFFTTKA PGKGTGLGLA TVYGIVQQSG GFLEVQSELG KGTTFRVCLP
AVETKPKTVA DVVVAAPKQR ASGVILVVED EEPVRRLAIA GLQERGYTVL AAANGREALA
VIAAQNRPVD LIVTDVIMPE MGGRELFDVL KRDYPGVKVL FMSGYTDRSL AELGAELEAS
LMPKPFTPTA LAQKVGDILE PNKARTEVKI S