Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0458 |
Symbol | |
ID | 4069453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 549937 |
End bp | 550455 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637982462 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_589537 |
Protein GI | 94967489 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.302522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.60857 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGTTCA AAGTTGATGA AGCGGACCTG ATGATCCTCA ACGAATTGCA GCAAGACTCA GGACGGCCGA TCCATGAACT AGCCGACTGC GTGGGGATAT CGATGCCGTC ATGCGCGAGA CGGGTGAAGC GACTCGAGGA GCATGGTGTG ATCGAACGCT ATGTTGCCCT TCTGAATCCC TCTGCCCTCG GCCTCGATCT GGACGTTTTT ATTAGCGTTC GACTCAACAC ACAGACATTG AAAGCCATGG ACGAGTTTAA AGAACTTGTC GCTCGCATGC CTGAAGTTGT GGAGTGCTAC GCGCTGACCG GAGACTCAGA CTTCCTGCTG CACGTGCGCA CTCCGGGGGT GAAGGAATTC AACTCCTGGA TGCAAGGAAG CTTAATCGGA GTTCCGAGTA TCTTCGCCAC CCACTCCAAT ATTTCTCTTG AGCGCATTAA ATACTCCACA TCGCTGCCCA TCCCCAAGAA AAAAGGGACG TCTCGACCGG CCAAGCGAAA AGCCGATCGA AAAAAGTAG
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Protein sequence | MTFKVDEADL MILNELQQDS GRPIHELADC VGISMPSCAR RVKRLEEHGV IERYVALLNP SALGLDLDVF ISVRLNTQTL KAMDEFKELV ARMPEVVECY ALTGDSDFLL HVRTPGVKEF NSWMQGSLIG VPSIFATHSN ISLERIKYST SLPIPKKKGT SRPAKRKADR KK
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