Gene Acid345_0458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0458 
Symbol 
ID4069453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp549937 
End bp550455 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content53% 
IMG OID637982462 
ProductAsnC family transcriptional regulator 
Protein accessionYP_589537 
Protein GI94967489 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.302522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.60857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGTTCA AAGTTGATGA AGCGGACCTG ATGATCCTCA ACGAATTGCA GCAAGACTCA 
GGACGGCCGA TCCATGAACT AGCCGACTGC GTGGGGATAT CGATGCCGTC ATGCGCGAGA
CGGGTGAAGC GACTCGAGGA GCATGGTGTG ATCGAACGCT ATGTTGCCCT TCTGAATCCC
TCTGCCCTCG GCCTCGATCT GGACGTTTTT ATTAGCGTTC GACTCAACAC ACAGACATTG
AAAGCCATGG ACGAGTTTAA AGAACTTGTC GCTCGCATGC CTGAAGTTGT GGAGTGCTAC
GCGCTGACCG GAGACTCAGA CTTCCTGCTG CACGTGCGCA CTCCGGGGGT GAAGGAATTC
AACTCCTGGA TGCAAGGAAG CTTAATCGGA GTTCCGAGTA TCTTCGCCAC CCACTCCAAT
ATTTCTCTTG AGCGCATTAA ATACTCCACA TCGCTGCCCA TCCCCAAGAA AAAAGGGACG
TCTCGACCGG CCAAGCGAAA AGCCGATCGA AAAAAGTAG
 
Protein sequence
MTFKVDEADL MILNELQQDS GRPIHELADC VGISMPSCAR RVKRLEEHGV IERYVALLNP 
SALGLDLDVF ISVRLNTQTL KAMDEFKELV ARMPEVVECY ALTGDSDFLL HVRTPGVKEF
NSWMQGSLIG VPSIFATHSN ISLERIKYST SLPIPKKKGT SRPAKRKADR KK