| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0454 |
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| Symbol | |
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| ID | 4071701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 542580 |
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| End bp | 545030 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637982458 |
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| Product | formate dehydrogenase |
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| Protein accession | YP_589533 |
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| Protein GI | 94967485 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0891729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.433565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACC ACTGGGCCGA CATGCAGCAT TGCAAGGCGA TCCTGGTGGA AGGCAGCAAC
GCAGCCGAAA ACCACGTCAT GGCCATGAAG TGGATCCGTA AAGCGCAGGA AAACGGCGCC
ATCATTATCC ACGTGGACCC GCGGTTCACA CGAACCTCCG CTGGAGCCGA TATTTTCGCC
CGCATTCGGC CGGGGGCAGA TGCAGCGTTC TTGAACGCGA TGATTAACCA CATCCTGGAG
AACAAACTCT ACGATCAGGA TTATGTGGAG ACACACACCA ATGCTTTGAT GATCGGGAAC
GCCGACTTCG ACTTCAAAGA CGGCCTGTTC AGCGGATACG ACGAAGAAGG TCACAAGTAC
AAAACGGACA CCTGGGGCTA TCAACTGGAT GGTTCCGGGA AACCACGTCA CGCGACAAGC
CTCGACGATC CCCATTGTGT GTTCTCGACG CTGCGCAAGT TCTTCGCGCG TTACACGCTC
GAAGTCGGCG AGCGCATGTC CGGCATTCCC GCGGCACAGA TCAAGCTGAT TGCCGAGACC
ATGGCAAAGC ACCGCCCTGG GACGATTCTC TATGCCCTTG GCATGACGCA GCACACGACT
GCTGTCCAAG GCATCCGCGC CTTCACCATC TTCCAACTTC TTCTCGGAAA TATTGGGAAG
CCGGGCGGCG GCGTGAATGC GCTCCGCGGC GAGCCAAACG TTCAGGGCGC CTGCGACATG
GCGGTTCTGA ACAACTACAT GCCGGGCTAT CTCAACTACC CGGTGCATAC CGAGCCGACA
CTCGCGGCAT GGACCGTGAA CAACGGCAGC TTGCGGCGTA AATATCTGGT CAATACGTTG
AAGGCGTTCT ACGGCGACGC AGCCACCGCA GAGAACGAGT TCTGCTACGC GTGGCTGCCG
AAGCGAAATA GTGCAAAGGA TTACAGCGCC TACGGAATCT TCGAGAGTGC CCTCGCCGGC
AACATGAAGC TGCTGTGGAT CGCGGGTCAA AATCCCGCAG TGAGCTCTCC CAATCTCAAG
CTGGTTTTTG AAGCGCTTGG AAATCTGGAA ACGCTGGTTG TGCAGGAATT GTGGGAGACC
GAAACCGCCG CGTTCTGGAA ACGCCCCGGA GTTGATCCGA AGTCCGTGAA AACGGAAGTA
TTCCTGCTTC CGGCCGCGTT CTTCATGGAG AAGCAGGGCA CCATTACCAA CTCGGGCGCC
ATGGTGCAGT GGAGATACAA AGCCGTTCCA CCTCCCGGAC AGGCCAAGCC TGATGGCGAA
ATCGTGGATA TCGTCTATCG CCGAGTGCGT GATCTGCTGA AGGATTCGAC CGATCCCAAA
GACCAAATCG TGAAGCGTGC GTTCTGGACG TACACCACTC CCGAGGATGT CTTGCGGGAG
ATCAACGGCC GCGCCCTGCA CGATATTCCA GGCACCGACC TGAAAGCCGG TACCCTCGCG
AGCCGCATCG CCGACCTGAA AGCCGATGGT TCAACCTCTT CTGGCTGCTG GATCTACGCC
GGGGTCTTTT CAAAAGGCGA GAACCTCTCG AAGCGGCGTG ACCACCGCAC CGACCCCGGC
AAACTTGGCC TCTATCCGAA CTTCGGATGG ACCTGGCCGA ACAACATGCG GGTGCTTTAC
AACCGTGCTT CCTGCGATCG CCATGGTAAG CCCTATCCCG GTTCGAAACC GATCGTATGG
TGGGACGAAG AAGCGAAGCG CTGGACTGGC TATGACGTTC CCGATGTGCC GGTAATCACT
GACGGTCCCA ACACGCCGAA TGGACAGCGA GCGTTCCATA TGAATGCCGA GGGCGTAGCG
CGCCTCTTCG CTGCCGTTTA CAAGGATCCA GAACCTGCCA GCGATGATCT GTGGCGCGAC
GCCAGTTACG TCCCCAAGGA CGGTCCGCTG CCGGAAATGT ACGAACCCGT GGAGAGTCCG
GTAGAGAACC CGATGCACCC GAAGGTGCGG AATAACCCCA TGCTGAAGTA TCCGCGTGTC
GGTAGCATCC ATCAACCCAT CGGCACCGCG AAAGATTTTC CTTACGTCCT TATGACCTCA
ACCGTAGCCG AACATTGGTG CGGCGGCTCC ACGACTCGCA ACAATCCCTG GCTGAACGAG
TTGATGCCGG AACCTGTTTG CGAGATCCCA GAGGTCCTAG GGTCGAAGCT TTCCGTTAAA
TCCGGTGACT GGGTGAAGGT CTCGTCGGCT CGAGGAGAAG TTGAAGTGAA GGCTGTCGTC
ACACCGCGCA TGCAGCCGCT CCAAATCGCG GGACAGCAAG TCATCATTGT CTGGATGCCC
TACAACTGGG GCTTCCAGGG CCTCTCCACT GGCCCGAGTG TGAACCACCT CACAATCGAC
GCCGTGGATC CGGGGGCAGG TACGCAGGAG ACGAAAGCGT GTCTCGTAAA TGTCGTCAAG
GTTCGTGACG CCAGCGCAAG GCGTTCCGAT CCCAGAGGGA GGCGCGCATG A
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| Protein sequence | MTNHWADMQH CKAILVEGSN AAENHVMAMK WIRKAQENGA IIIHVDPRFT RTSAGADIFA
RIRPGADAAF LNAMINHILE NKLYDQDYVE THTNALMIGN ADFDFKDGLF SGYDEEGHKY
KTDTWGYQLD GSGKPRHATS LDDPHCVFST LRKFFARYTL EVGERMSGIP AAQIKLIAET
MAKHRPGTIL YALGMTQHTT AVQGIRAFTI FQLLLGNIGK PGGGVNALRG EPNVQGACDM
AVLNNYMPGY LNYPVHTEPT LAAWTVNNGS LRRKYLVNTL KAFYGDAATA ENEFCYAWLP
KRNSAKDYSA YGIFESALAG NMKLLWIAGQ NPAVSSPNLK LVFEALGNLE TLVVQELWET
ETAAFWKRPG VDPKSVKTEV FLLPAAFFME KQGTITNSGA MVQWRYKAVP PPGQAKPDGE
IVDIVYRRVR DLLKDSTDPK DQIVKRAFWT YTTPEDVLRE INGRALHDIP GTDLKAGTLA
SRIADLKADG STSSGCWIYA GVFSKGENLS KRRDHRTDPG KLGLYPNFGW TWPNNMRVLY
NRASCDRHGK PYPGSKPIVW WDEEAKRWTG YDVPDVPVIT DGPNTPNGQR AFHMNAEGVA
RLFAAVYKDP EPASDDLWRD ASYVPKDGPL PEMYEPVESP VENPMHPKVR NNPMLKYPRV
GSIHQPIGTA KDFPYVLMTS TVAEHWCGGS TTRNNPWLNE LMPEPVCEIP EVLGSKLSVK
SGDWVKVSSA RGEVEVKAVV TPRMQPLQIA GQQVIIVWMP YNWGFQGLST GPSVNHLTID
AVDPGAGTQE TKACLVNVVK VRDASARRSD PRGRRA
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